Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL451062.2-201ENST00000427515 271 ntBASIC4.05□□□□□ -1.76
RTN3O95197 AC011742.1-201ENST00000431448 434 ntBASIC4.05□□□□□ -1.76
RTN3O95197 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.05□□□□□ -1.76
RTN3O95197 AC096638.2-201ENST00000434965 711 ntBASIC4.05□□□□□ -1.76
RTN3O95197 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.05□□□□□ -1.76
RTN3O95197 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.05□□□□□ -1.76
RTN3O95197 RPL7P15-201ENST00000461190 712 ntBASIC4.05□□□□□ -1.76
RTN3O95197 RPL23AP62-201ENST00000463396 453 ntBASIC4.05□□□□□ -1.76
RTN3O95197 AC093278.1-201ENST00000494700 600 ntBASIC4.05□□□□□ -1.76
RTN3O95197 AC096751.1-202ENST00000502691 1067 ntBASIC4.05□□□□□ -1.76
RTN3O95197 AC093809.1-201ENST00000509155 340 ntBASIC4.05□□□□□ -1.76
RTN3O95197 AC004062.1-201ENST00000509926 645 ntBASIC4.05□□□□□ -1.76
RTN3O95197 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RTN3O95197 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.05□□□□□ -1.76
RTN3O95197 AC026407.1-201ENST00000518369 204 ntBASIC4.05□□□□□ -1.76
RTN3O95197 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.05□□□□□ -1.76
RTN3O95197 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.05□□□□□ -1.76
RTN3O95197 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RTN3O95197 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
RTN3O95197 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
RTN3O95197 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.05□□□□□ -1.76
RTN3O95197 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.05□□□□□ -1.76
RTN3O95197 AC136618.2-201ENST00000575091 400 ntBASIC4.05□□□□□ -1.76
RTN3O95197 AC087499.8-201ENST00000578406 226 ntBASIC4.05□□□□□ -1.76
RTN3O95197 MIR3690-201ENST00000580266 75 ntBASIC4.05□□□□□ -1.76
RTN3O95197 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.05□□□□□ -1.76
RTN3O95197 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
RTN3O95197 NIFKP6-201ENST00000598115 845 ntBASIC4.05□□□□□ -1.76
RTN3O95197 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.05□□□□□ -1.76
RTN3O95197 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.05□□□□□ -1.76
RTN3O95197 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.05□□□□□ -1.76
RTN3O95197 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
RTN3O95197 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RTN3O95197 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RTN3O95197 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
RTN3O95197 AL353746.1-201ENST00000566293 6881 ntBASIC4.05□□□□□ -1.76
RTN3O95197 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.05□□□□□ -1.76
RTN3O95197 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTN3O95197 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RTN3O95197 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTN3O95197 SNORA62.3-201ENST00000365110 153 ntBASIC4.04□□□□□ -1.76
RTN3O95197 RNU6-723P-201ENST00000383973 107 ntBASIC4.04□□□□□ -1.76
RTN3O95197 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RTN3O95197 MIR320C1-201ENST00000408566 88 ntBASIC4.04□□□□□ -1.76
RTN3O95197 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.04□□□□□ -1.76
RTN3O95197 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.04□□□□□ -1.76
RTN3O95197 AL591419.1-201ENST00000427423 339 ntBASIC4.04□□□□□ -1.76
RTN3O95197 MTND5P25-201ENST00000430499 799 ntBASIC4.04□□□□□ -1.76
RTN3O95197 AL445584.1-201ENST00000431451 330 ntBASIC4.04□□□□□ -1.76
RTN3O95197 ATP5HP2-201ENST00000433885 485 ntBASIC4.04□□□□□ -1.76
RTN3O95197 AL591503.2-201ENST00000442314 1005 ntBASIC4.04□□□□□ -1.76
RTN3O95197 NOTCH2P1-201ENST00000443481 624 ntBASIC4.04□□□□□ -1.76
RTN3O95197 MTCO1P27-201ENST00000448269 226 ntBASIC4.04□□□□□ -1.76
RTN3O95197 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.04□□□□□ -1.76
RTN3O95197 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.04□□□□□ -1.76
RTN3O95197 snoU13.4-201ENST00000458916 104 ntBASIC4.04□□□□□ -1.76
RTN3O95197 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.04□□□□□ -1.76
RTN3O95197 RPL21P104-201ENST00000464143 478 ntBASIC4.04□□□□□ -1.76
RTN3O95197 VN1R17P-201ENST00000472048 1090 ntBASIC4.04□□□□□ -1.76
RTN3O95197 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.04□□□□□ -1.76
RTN3O95197 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.04□□□□□ -1.76
RTN3O95197 RPL7P24-201ENST00000493052 752 ntBASIC4.04□□□□□ -1.76
RTN3O95197 AL024509.2-201ENST00000493462 493 ntBASIC4.04□□□□□ -1.76
RTN3O95197 HSPE1P23-201ENST00000509838 286 ntBASIC4.04□□□□□ -1.76
RTN3O95197 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.04□□□□□ -1.76
RTN3O95197 RNU6-1129P-201ENST00000515964 104 ntBASIC4.04□□□□□ -1.76
RTN3O95197 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.04□□□□□ -1.76
RTN3O95197 OR5AP1P-201ENST00000529730 940 ntBASIC4.04□□□□□ -1.76
RTN3O95197 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.04□□□□□ -1.76
RTN3O95197 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.04□□□□□ -1.76
RTN3O95197 OR7K1P-201ENST00000546439 926 ntBASIC4.04□□□□□ -1.76
RTN3O95197 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.04□□□□□ -1.76
RTN3O95197 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.04□□□□□ -1.76
RTN3O95197 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.04□□□□□ -1.76
RTN3O95197 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.04□□□□□ -1.76
RTN3O95197 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.04□□□□□ -1.76
RTN3O95197 AP000811.1-201ENST00000603803 651 ntBASIC4.04□□□□□ -1.76
RTN3O95197 AC106791.2-201ENST00000604680 391 ntBASIC4.04□□□□□ -1.76
RTN3O95197 AC245389.1-201ENST00000605141 529 ntBASIC4.04□□□□□ -1.76
RTN3O95197 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.04□□□□□ -1.76
RTN3O95197 AC015967.1-201ENST00000619893 476 ntBASIC4.04□□□□□ -1.76
RTN3O95197 AL360181.4-201ENST00000621752 134 ntBASIC4.04□□□□□ -1.76
RTN3O95197 AC079416.3-201ENST00000624479 549 ntBASIC4.04□□□□□ -1.76
RTN3O95197 AC048347.1-201ENST00000624621 427 ntBASIC4.04□□□□□ -1.76
RTN3O95197 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.04□□□□□ -1.76
RTN3O95197 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.04□□□□□ -1.76
RTN3O95197 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTN3O95197 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.04□□□□□ -1.76
RTN3O95197 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.04□□□□□ -1.76
RTN3O95197 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.04□□□□□ -1.76
RTN3O95197 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RTN3O95197 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RTN3O95197 AL133383.2-201ENST00000622958 2336 ntBASIC4.04□□□□□ -1.76
RTN3O95197 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTN3O95197 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RTN3O95197 GABPAP-201ENST00000419271 1356 ntBASIC4.03□□□□□ -1.76
RTN3O95197 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.03□□□□□ -1.76
RTN3O95197 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTN3O95197 IPO8P1-201ENST00000455509 3109 ntBASIC4.03□□□□□ -1.76
RTN3O95197 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms