Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.67□□□□□ -1.66
CDKL5O76039 HIGD1AP5-201ENST00000529959 259 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 AP004247.1-201ENST00000531556 1289 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.67□□□□□ -1.66
CDKL5O76039 AC091516.1-201ENST00000549191 703 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 AC090502.2-201ENST00000549267 280 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 CBX3P5-201ENST00000552017 521 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 EIF5A2P1-201ENST00000564027 460 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.67□□□□□ -1.66
CDKL5O76039 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.67□□□□□ -1.66
CDKL5O76039 AC008687.2-201ENST00000597865 520 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 AC112187.2-201ENST00000604345 283 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 AC097468.3-201ENST00000607956 456 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.67□□□□□ -1.66
CDKL5O76039 AC243773.3-201ENST00000613270 256 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 MIR6863-201ENST00000636112 90 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDKL5O76039 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.67□□□□□ -1.66
CDKL5O76039 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CDKL5O76039 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDKL5O76039 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CDKL5O76039 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.66□□□□□ -1.66
CDKL5O76039 AC025125.1-201ENST00000624743 1922 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDKL5O76039 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL5O76039 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.66□□□□□ -1.66
CDKL5O76039 RNU6-809P-201ENST00000384461 107 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 RPS26P8-201ENST00000393490 348 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CDKL5O76039 AL121972.1-201ENST00000402023 252 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 RNU2-28P-201ENST00000410457 189 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 RPS3AP3-201ENST00000411933 242 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.66□□□□□ -1.66
CDKL5O76039 RPL7AP73-201ENST00000413490 353 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 RPL7P30-201ENST00000420888 709 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL5O76039 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.66□□□□□ -1.66
CDKL5O76039 AC233981.1-201ENST00000423224 461 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 AC011742.1-201ENST00000431448 434 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.66□□□□□ -1.66
CDKL5O76039 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.66□□□□□ -1.66
CDKL5O76039 AC073614.1-201ENST00000438690 650 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 PGBD4P3-201ENST00000440731 581 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 AL590365.1-201ENST00000450788 243 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.66□□□□□ -1.66
CDKL5O76039 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 AC005229.2-201ENST00000456995 399 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 AL132838.2-201ENST00000492041 314 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 AC020593.1-201ENST00000507399 299 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.66□□□□□ -1.66
CDKL5O76039 AC093809.1-201ENST00000509155 340 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 PTGES3P3-201ENST00000511479 482 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.66□□□□□ -1.66
CDKL5O76039 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.66□□□□□ -1.66
CDKL5O76039 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.66□□□□□ -1.66
CDKL5O76039 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.66□□□□□ -1.66
CDKL5O76039 AC022878.1-201ENST00000530684 149 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.66□□□□□ -1.66
CDKL5O76039 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.66□□□□□ -1.66
CDKL5O76039 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.66□□□□□ -1.66
CDKL5O76039 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.66□□□□□ -1.66
CDKL5O76039 AC110743.1-201ENST00000584870 478 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 AC009977.1-201ENST00000586015 570 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.66□□□□□ -1.66
CDKL5O76039 AC115085.1-201ENST00000588924 229 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.66□□□□□ -1.66
CDKL5O76039 AC010200.2-201ENST00000605098 235 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 RNU4-89P-201ENST00000607443 133 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 AC103710.1-201ENST00000610003 901 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 MIR6868-201ENST00000611215 58 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL5O76039 AL592295.2-201ENST00000612578 206 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 AL591424.2-201ENST00000617023 128 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 AC108479.2-201ENST00000617314 601 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 AC136475.10-201ENST00000620253 385 ntBASIC4.66□□□□□ -1.66
CDKL5O76039 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CDKL5O76039 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CDKL5O76039 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL5O76039 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL5O76039 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL5O76039 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDKL5O76039 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CDKL5O76039 Y_RNA.296-201ENST00000364930 108 ntBASIC4.65□□□□□ -1.67
CDKL5O76039 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.65□□□□□ -1.67
CDKL5O76039 Y_RNA.453-201ENST00000384223 109 ntBASIC4.65□□□□□ -1.67
CDKL5O76039 RNU6-780P-201ENST00000391030 104 ntBASIC4.65□□□□□ -1.67
CDKL5O76039 SNRPEP2-201ENST00000397592 279 ntBASIC4.65□□□□□ -1.67
CDKL5O76039 CALM2P3-201ENST00000400429 449 ntBASIC4.65□□□□□ -1.67
CDKL5O76039 FGF7P8-201ENST00000402994 292 ntBASIC4.65□□□□□ -1.67
CDKL5O76039 FCF1P10-201ENST00000407590 479 ntBASIC4.65□□□□□ -1.67
CDKL5O76039 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.65□□□□□ -1.67
CDKL5O76039 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.65□□□□□ -1.67
CDKL5O76039 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.65□□□□□ -1.67
CDKL5O76039 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.65□□□□□ -1.67
CDKL5O76039 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.65□□□□□ -1.67
CDKL5O76039 NPM1P34-201ENST00000428821 893 ntBASIC4.65□□□□□ -1.67
CDKL5O76039 MTCO3P21-201ENST00000430791 643 ntBASIC4.65□□□□□ -1.67
CDKL5O76039 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.65□□□□□ -1.67
CDKL5O76039 AC087650.1-201ENST00000431445 468 ntBASIC4.65□□□□□ -1.67
CDKL5O76039 AC010881.1-201ENST00000433830 235 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms