Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 RNA5SP385-201ENST00000515947 110 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPHP4O75161 OR4U1P-201ENST00000554958 912 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 MIR5007-201ENST00000583098 95 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 AC023043.2-201ENST00000589678 1026 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.33□□□□□ -1.88
NPHP4O75161 AL355816.1-201ENST00000607951 118 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 AC135803.1-201ENST00000608748 565 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 AC103710.2-201ENST00000609912 942 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 AC107871.2-201ENST00000612894 502 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 MIR6845-201ENST00000613182 61 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 AC011472.4-201ENST00000615848 491 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 AC096656.1-201ENST00000623826 1364 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NPHP4O75161 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPHP4O75161 CUL1P1-201ENST00000509510 2425 ntBASIC3.32□□□□□ -1.88
NPHP4O75161 RNU1-17P-201ENST00000363022 152 ntBASIC3.32□□□□□ -1.88
NPHP4O75161 SNORA26.9-201ENST00000391322 122 ntBASIC3.32□□□□□ -1.88
NPHP4O75161 TRGV6-201ENST00000417928 299 ntBASIC3.32□□□□□ -1.88
NPHP4O75161 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.32□□□□□ -1.88
NPHP4O75161 RPL30P3-201ENST00000424262 333 ntBASIC3.32□□□□□ -1.88
NPHP4O75161 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.32□□□□□ -1.88
NPHP4O75161 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.32□□□□□ -1.88
NPHP4O75161 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.32□□□□□ -1.88
NPHP4O75161 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.32□□□□□ -1.88
NPHP4O75161 AC126182.1-201ENST00000478134 357 ntBASIC3.32□□□□□ -1.88
NPHP4O75161 AC106872.3-201ENST00000495104 446 ntBASIC3.32□□□□□ -1.88
NPHP4O75161 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.32□□□□□ -1.88
NPHP4O75161 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.32□□□□□ -1.88
NPHP4O75161 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.32□□□□□ -1.88
NPHP4O75161 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.32□□□□□ -1.88
NPHP4O75161 AP004247.3-201ENST00000608682 624 ntBASIC3.32□□□□□ -1.88
NPHP4O75161 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPHP4O75161 AP001486.2-201ENST00000561652 5113 ntBASIC3.32□□□□□ -1.88
NPHP4O75161 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.31□□□□□ -1.88
NPHP4O75161 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NPHP4O75161 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPHP4O75161 Y_RNA.508-201ENST00000384502 114 ntBASIC3.31□□□□□ -1.88
NPHP4O75161 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPHP4O75161 AL390023.1-201ENST00000428836 262 ntBASIC3.31□□□□□ -1.88
NPHP4O75161 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.31□□□□□ -1.88
NPHP4O75161 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.31□□□□□ -1.88
NPHP4O75161 RPL23AP62-201ENST00000463396 453 ntBASIC3.31□□□□□ -1.88
NPHP4O75161 AC023050.1-201ENST00000498198 304 ntBASIC3.31□□□□□ -1.88
NPHP4O75161 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.31□□□□□ -1.88
NPHP4O75161 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.31□□□□□ -1.88
NPHP4O75161 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.31□□□□□ -1.88
NPHP4O75161 AC090695.1-201ENST00000561269 1222 ntBASIC3.31□□□□□ -1.88
NPHP4O75161 MIR4506-201ENST00000584693 77 ntBASIC3.31□□□□□ -1.88
NPHP4O75161 AC115085.1-201ENST00000588924 229 ntBASIC3.31□□□□□ -1.88
NPHP4O75161 AC083899.3-201ENST00000603413 594 ntBASIC3.31□□□□□ -1.88
NPHP4O75161 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.31□□□□□ -1.88
NPHP4O75161 MIR6733-201ENST00000635723 61 ntBASIC3.31□□□□□ -1.88
NPHP4O75161 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPHP4O75161 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPHP4O75161 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NPHP4O75161 RNF6P1-201ENST00000444889 1784 ntBASIC3.3□□□□□ -1.88
NPHP4O75161 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NPHP4O75161 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPHP4O75161 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NPHP4O75161 RNU6-185P-201ENST00000384421 107 ntBASIC3.3□□□□□ -1.88
NPHP4O75161 ELOCP11-201ENST00000436690 332 ntBASIC3.3□□□□□ -1.88
NPHP4O75161 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NPHP4O75161 ELOCP16-201ENST00000444494 332 ntBASIC3.3□□□□□ -1.88
NPHP4O75161 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.3□□□□□ -1.88
NPHP4O75161 MTND2P8-201ENST00000450555 1025 ntBASIC3.3□□□□□ -1.88
NPHP4O75161 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.3□□□□□ -1.88
NPHP4O75161 AC108120.2-201ENST00000512973 294 ntBASIC3.3□□□□□ -1.88
NPHP4O75161 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NPHP4O75161 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.3□□□□□ -1.88
NPHP4O75161 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NPHP4O75161 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.3□□□□□ -1.88
NPHP4O75161 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.3□□□□□ -1.88
NPHP4O75161 MIR5092-201ENST00000583139 88 ntBASIC3.3□□□□□ -1.88
NPHP4O75161 AC069304.3-201ENST00000603938 1084 ntBASIC3.3□□□□□ -1.88
NPHP4O75161 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPHP4O75161 MTND5P29-201ENST00000458676 1807 ntBASIC3.3□□□□□ -1.88
NPHP4O75161 MTCO1P14-201ENST00000441695 1559 ntBASIC3.3□□□□□ -1.88
NPHP4O75161 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.29□□□□□ -1.88
NPHP4O75161 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NPHP4O75161 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
NPHP4O75161 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.29□□□□□ -1.88
NPHP4O75161 AL450338.1-201ENST00000407987 512 ntBASIC3.29□□□□□ -1.88
NPHP4O75161 AC010385.1-201ENST00000412374 256 ntBASIC3.29□□□□□ -1.88
NPHP4O75161 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.29□□□□□ -1.88
NPHP4O75161 TPTE2P1-204ENST00000435256 593 ntBASIC3.29□□□□□ -1.88
NPHP4O75161 USP9YP7-201ENST00000436723 430 ntBASIC3.29□□□□□ -1.88
NPHP4O75161 USP9YP32-201ENST00000452432 430 ntBASIC3.29□□□□□ -1.88
NPHP4O75161 HMGB1P26-201ENST00000452520 628 ntBASIC3.29□□□□□ -1.88
NPHP4O75161 RN7SL297P-201ENST00000483161 293 ntBASIC3.29□□□□□ -1.88
NPHP4O75161 MTATP6P22-201ENST00000507369 598 ntBASIC3.29□□□□□ -1.88
NPHP4O75161 RNA5SP445-201ENST00000515889 115 ntBASIC3.29□□□□□ -1.88
NPHP4O75161 AC123904.3-201ENST00000547218 814 ntBASIC3.29□□□□□ -1.88
NPHP4O75161 AC135628.1-201ENST00000568867 534 ntBASIC3.29□□□□□ -1.88
NPHP4O75161 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.29□□□□□ -1.88
NPHP4O75161 LRRC77P-213ENST00000637727 880 ntBASIC3.29□□□□□ -1.88
NPHP4O75161 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPHP4O75161 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.28□□□□□ -1.88
NPHP4O75161 RNU6-452P-201ENST00000384406 107 ntBASIC3.28□□□□□ -1.88
NPHP4O75161 AL023284.1-201ENST00000403956 276 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms