Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.83□□□□□ -1.96
SHOX2O60902 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.83□□□□□ -1.96
SHOX2O60902 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.83□□□□□ -1.96
SHOX2O60902 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.83□□□□□ -1.96
SHOX2O60902 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.83□□□□□ -1.96
SHOX2O60902 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.83□□□□□ -1.96
SHOX2O60902 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.83□□□□□ -1.96
SHOX2O60902 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.83□□□□□ -1.96
SHOX2O60902 UBL5P2-201ENST00000583788 219 ntBASIC2.83□□□□□ -1.96
SHOX2O60902 CKS1BP3-201ENST00000600888 237 ntBASIC2.83□□□□□ -1.96
SHOX2O60902 AL355812.1-201ENST00000603215 216 ntBASIC2.83□□□□□ -1.96
SHOX2O60902 DUXAP3-201ENST00000603616 594 ntBASIC2.83□□□□□ -1.96
SHOX2O60902 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.83□□□□□ -1.96
SHOX2O60902 AP003400.6-201ENST00000624698 740 ntBASIC2.83□□□□□ -1.96
SHOX2O60902 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.83□□□□□ -1.96
SHOX2O60902 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.83□□□□□ -1.96
SHOX2O60902 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.83□□□□□ -1.96
SHOX2O60902 AC103988.1-201ENST00000566382 2177 ntBASIC2.83□□□□□ -1.96
SHOX2O60902 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHOX2O60902 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SHOX2O60902 MIR26A1-201ENST00000362205 77 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 RNU6-252P-201ENST00000363232 107 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 SNORA38.1-201ENST00000364172 131 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 RNU6-1151P-201ENST00000384684 107 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 RPS3AP26-201ENST00000398259 784 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 AL591034.1-201ENST00000407447 340 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 MIR1261-201ENST00000408659 82 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.82□□□□□ -1.96
SHOX2O60902 TATDN1P1-201ENST00000414123 891 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 MTCO3P12-201ENST00000416718 547 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 MRPL50P2-201ENST00000416821 482 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 SSXP9-201ENST00000417503 292 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 AC073508.1-201ENST00000428866 656 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.82□□□□□ -1.96
SHOX2O60902 AC005019.1-201ENST00000436455 431 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.82□□□□□ -1.96
SHOX2O60902 RN7SL863P-201ENST00000462370 296 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 CABYRP1-201ENST00000465493 1045 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.82□□□□□ -1.96
SHOX2O60902 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.82□□□□□ -1.96
SHOX2O60902 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.82□□□□□ -1.96
SHOX2O60902 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.82□□□□□ -1.96
SHOX2O60902 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SHOX2O60902 AC092470.1-201ENST00000546187 132 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.82□□□□□ -1.96
SHOX2O60902 AC067805.1-201ENST00000559344 470 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 AL669831.4-202ENST00000590817 238 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 AC006023.1-201ENST00000603944 259 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 DPRXP5-201ENST00000604662 539 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 BX322635.1-201ENST00000605804 496 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 AL137847.3-201ENST00000611521 109 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 AL162574.2-201ENST00000614618 657 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SHOX2O60902 AC022509.4-201ENST00000621404 572 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.82□□□□□ -1.96
SHOX2O60902 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.82□□□□□ -1.96
SHOX2O60902 AC093010.3-201ENST00000570269 15214 ntBASIC2.82□□□□□ -1.96
SHOX2O60902 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.82□□□□□ -1.96
SHOX2O60902 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHOX2O60902 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.82□□□□□ -1.96
SHOX2O60902 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHOX2O60902 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.82□□□□□ -1.96
SHOX2O60902 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHOX2O60902 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHOX2O60902 RNA5SP80-201ENST00000410475 111 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 AC109780.2-201ENST00000413467 845 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.81□□□□□ -1.96
SHOX2O60902 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.81□□□□□ -1.96
SHOX2O60902 AC097713.2-201ENST00000430199 356 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.81□□□□□ -1.96
SHOX2O60902 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.81□□□□□ -1.96
SHOX2O60902 RPL37P4-201ENST00000448908 268 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.81□□□□□ -1.96
SHOX2O60902 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.81□□□□□ -1.96
SHOX2O60902 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.81□□□□□ -1.96
SHOX2O60902 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SHOX2O60902 AC104108.1-201ENST00000509930 412 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 RNU6-711P-201ENST00000517255 106 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 HPRT1P3-201ENST00000539521 576 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.81□□□□□ -1.96
SHOX2O60902 AC025918.2-201ENST00000558683 763 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.81□□□□□ -1.96
SHOX2O60902 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.81□□□□□ -1.96
SHOX2O60902 MTCO3P24-201ENST00000572729 782 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.81□□□□□ -1.96
SHOX2O60902 MIR4325-201ENST00000583049 90 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 MIR4769-201ENST00000584126 77 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.81□□□□□ -1.96
SHOX2O60902 YPEL5P2-201ENST00000605553 359 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 AC068831.7-201ENST00000616954 363 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SHOX2O60902 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 AL356118.1-201ENST00000635272 1078 ntBASIC2.81□□□□□ -1.96
SHOX2O60902 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.81□□□□□ -1.96
SHOX2O60902 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHOX2O60902 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHOX2O60902 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHOX2O60902 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.8□□□□□ -1.96
SHOX2O60902 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHOX2O60902 MIR22-201ENST00000362190 85 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms