Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.7□□□□□ -1.82
CACNA1FO60840 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.7□□□□□ -1.82
CACNA1FO60840 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.7□□□□□ -1.82
CACNA1FO60840 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.7□□□□□ -1.82
CACNA1FO60840 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.7□□□□□ -1.82
CACNA1FO60840 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.7□□□□□ -1.82
CACNA1FO60840 AC090136.1-201ENST00000520009 240 ntBASIC3.7□□□□□ -1.82
CACNA1FO60840 H3F3AP1-201ENST00000559984 334 ntBASIC3.7□□□□□ -1.82
CACNA1FO60840 MTND4LP24-201ENST00000572277 291 ntBASIC3.7□□□□□ -1.82
CACNA1FO60840 AC103987.3-201ENST00000582071 292 ntBASIC3.7□□□□□ -1.82
CACNA1FO60840 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.7□□□□□ -1.82
CACNA1FO60840 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.7□□□□□ -1.82
CACNA1FO60840 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CACNA1FO60840 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.7□□□□□ -1.82
CACNA1FO60840 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.7□□□□□ -1.82
CACNA1FO60840 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CACNA1FO60840 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CACNA1FO60840 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CACNA1FO60840 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CACNA1FO60840 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CACNA1FO60840 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.69□□□□□ -1.82
CACNA1FO60840 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
CACNA1FO60840 MIR512-1-201ENST00000384913 84 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.69□□□□□ -1.82
CACNA1FO60840 RNA5SP274-201ENST00000410484 108 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 Y_RNA.619-201ENST00000410951 90 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 PTP4A1P5-201ENST00000420305 455 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 PNRC2P1-201ENST00000423940 420 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.69□□□□□ -1.82
CACNA1FO60840 NPM1P24-201ENST00000428039 894 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.69□□□□□ -1.82
CACNA1FO60840 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.69□□□□□ -1.82
CACNA1FO60840 MRPL35P4-201ENST00000453682 566 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AL035407.2-201ENST00000454090 378 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.69□□□□□ -1.82
CACNA1FO60840 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.69□□□□□ -1.82
CACNA1FO60840 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.69□□□□□ -1.82
CACNA1FO60840 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.69□□□□□ -1.82
CACNA1FO60840 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.69□□□□□ -1.82
CACNA1FO60840 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.69□□□□□ -1.82
CACNA1FO60840 AL590229.1-201ENST00000603497 542 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AL392112.1-201ENST00000605115 829 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 ATP1B3P1-201ENST00000605365 821 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AC013562.2-201ENST00000611632 603 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.69□□□□□ -1.82
CACNA1FO60840 PLCE1P1-201ENST00000622094 305 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.69□□□□□ -1.82
CACNA1FO60840 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.69□□□□□ -1.82
CACNA1FO60840 AC107081.3-201ENST00000612715 2034 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 FAM133CP-201ENST00000332869 704 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 MIR422A-201ENST00000362286 90 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 RNU6-859P-201ENST00000362728 107 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 Y_RNA.505-201ENST00000384489 102 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.69□□□□□ -1.82
CACNA1FO60840 AL592148.1-201ENST00000413568 445 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 TAF13P2-201ENST00000416876 286 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.69□□□□□ -1.82
CACNA1FO60840 FO393419.3-201ENST00000428741 282 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AL354941.1-201ENST00000438600 464 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 FGF7P5-201ENST00000441829 291 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 TXNP1-201ENST00000441872 371 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AC092685.1-201ENST00000447960 1243 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 MTND4LP3-201ENST00000468320 276 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AC090525.1-201ENST00000479116 478 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 OR5BM1P-201ENST00000512021 366 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 RNU6-759P-201ENST00000516740 103 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 MTCYBP19-201ENST00000517463 1124 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.69□□□□□ -1.82
CACNA1FO60840 AC024909.2-201ENST00000553035 286 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.69□□□□□ -1.82
CACNA1FO60840 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.69□□□□□ -1.82
CACNA1FO60840 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.69□□□□□ -1.82
CACNA1FO60840 MIR4716-201ENST00000579628 84 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AC022662.1-201ENST00000580252 331 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AC122133.1-201ENST00000613964 233 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AC007318.2-201ENST00000620999 243 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 AC092159.4-201ENST00000624944 550 ntBASIC3.69□□□□□ -1.82
CACNA1FO60840 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CACNA1FO60840 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CACNA1FO60840 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CACNA1FO60840 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CACNA1FO60840 SNORD116.1-201ENST00000365628 92 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 RNU6-1279P-201ENST00000383917 103 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 SNORD116-4-201ENST00000384733 96 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 MT-TP-201ENST00000387461 68 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 TIMM9P2-201ENST00000419324 266 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 RPL7P53-201ENST00000421245 739 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.68□□□□□ -1.82
CACNA1FO60840 RPL31P3-201ENST00000458430 332 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 AC104689.1-201ENST00000473356 768 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 RPS3AP22-201ENST00000488297 769 ntBASIC3.68□□□□□ -1.82
CACNA1FO60840 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.68□□□□□ -1.82
CACNA1FO60840 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.68□□□□□ -1.82
CACNA1FO60840 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.68□□□□□ -1.82
CACNA1FO60840 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.68□□□□□ -1.82
CACNA1FO60840 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.68□□□□□ -1.82
CACNA1FO60840 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.68□□□□□ -1.82
CACNA1FO60840 AC068446.3-201ENST00000555285 382 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms