Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MTND4LP20-201ENST00000402379 270 ntBASIC3.1□□□□□ -1.91
HCN1O60741 AL133384.1-201ENST00000412744 351 ntBASIC3.1□□□□□ -1.91
HCN1O60741 Z99755.1-201ENST00000414048 380 ntBASIC3.1□□□□□ -1.91
HCN1O60741 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN1O60741 LUZP4P1-201ENST00000415420 344 ntBASIC3.1□□□□□ -1.91
HCN1O60741 RAD23BP2-201ENST00000416003 1207 ntBASIC3.1□□□□□ -1.91
HCN1O60741 AL449283.1-202ENST00000418249 604 ntBASIC3.1□□□□□ -1.91
HCN1O60741 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN1O60741 AL354692.1-201ENST00000423044 315 ntBASIC3.1□□□□□ -1.91
HCN1O60741 DPPA2P1-201ENST00000428060 556 ntBASIC3.1□□□□□ -1.91
HCN1O60741 AC005326.1-201ENST00000429197 123 ntBASIC3.1□□□□□ -1.91
HCN1O60741 MTCO1P3-201ENST00000429327 192 ntBASIC3.1□□□□□ -1.91
HCN1O60741 SEPT7P5-201ENST00000434048 306 ntBASIC3.1□□□□□ -1.91
HCN1O60741 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN1O60741 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN1O60741 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN1O60741 snoU13.4-201ENST00000458916 104 ntBASIC3.1□□□□□ -1.91
HCN1O60741 VPS26AP1-201ENST00000483197 979 ntBASIC3.1□□□□□ -1.91
HCN1O60741 AC108078.3-201ENST00000502633 489 ntBASIC3.1□□□□□ -1.91
HCN1O60741 DSTNP2-201ENST00000504533 515 ntBASIC3.1□□□□□ -1.91
HCN1O60741 BOLA3P3-201ENST00000505182 232 ntBASIC3.1□□□□□ -1.91
HCN1O60741 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HCN1O60741 SNORD59.2-201ENST00000516873 68 ntBASIC3.1□□□□□ -1.91
HCN1O60741 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.1□□□□□ -1.91
HCN1O60741 AC010376.1-201ENST00000522101 334 ntBASIC3.1□□□□□ -1.91
HCN1O60741 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.1□□□□□ -1.91
HCN1O60741 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN1O60741 AC090502.2-201ENST00000549267 280 ntBASIC3.1□□□□□ -1.91
HCN1O60741 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.1□□□□□ -1.91
HCN1O60741 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.1□□□□□ -1.91
HCN1O60741 AC096947.1-201ENST00000603233 470 ntBASIC3.1□□□□□ -1.91
HCN1O60741 AC124312.4-201ENST00000605533 310 ntBASIC3.1□□□□□ -1.91
HCN1O60741 AL590240.3-201ENST00000621416 943 ntBASIC3.1□□□□□ -1.91
HCN1O60741 AC073476.4-201ENST00000628409 72 ntBASIC3.1□□□□□ -1.91
HCN1O60741 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.1□□□□□ -1.91
HCN1O60741 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HCN1O60741 Z83843.1-201ENST00000604070 3685 ntBASIC3.1□□□□□ -1.91
HCN1O60741 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HCN1O60741 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HCN1O60741 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HCN1O60741 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.09□□□□□ -1.91
HCN1O60741 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.09□□□□□ -1.91
HCN1O60741 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HCN1O60741 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HCN1O60741 SNORA51.6-201ENST00000384151 125 ntBASIC3.09□□□□□ -1.91
HCN1O60741 RPS3AP26-201ENST00000398259 784 ntBASIC3.09□□□□□ -1.91
HCN1O60741 MTCO3P12-201ENST00000416718 547 ntBASIC3.09□□□□□ -1.91
HCN1O60741 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HCN1O60741 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.09□□□□□ -1.91
HCN1O60741 GTF2IP3-201ENST00000433887 494 ntBASIC3.09□□□□□ -1.91
HCN1O60741 AC009969.1-201ENST00000438726 172 ntBASIC3.09□□□□□ -1.91
HCN1O60741 HSPE1P28-201ENST00000443139 211 ntBASIC3.09□□□□□ -1.91
HCN1O60741 AC004022.1-201ENST00000447766 1066 ntBASIC3.09□□□□□ -1.91
HCN1O60741 AC112492.1-201ENST00000449607 712 ntBASIC3.09□□□□□ -1.91
HCN1O60741 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.09□□□□□ -1.91
HCN1O60741 AC017015.1-201ENST00000477387 286 ntBASIC3.09□□□□□ -1.91
HCN1O60741 AC013828.1-201ENST00000481845 158 ntBASIC3.09□□□□□ -1.91
HCN1O60741 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HCN1O60741 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.09□□□□□ -1.91
HCN1O60741 AC026427.2-201ENST00000506228 536 ntBASIC3.09□□□□□ -1.91
HCN1O60741 MTATP6P9-201ENST00000515039 680 ntBASIC3.09□□□□□ -1.91
HCN1O60741 AC091163.3-201ENST00000518269 1144 ntBASIC3.09□□□□□ -1.91
HCN1O60741 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HCN1O60741 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.09□□□□□ -1.91
HCN1O60741 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.09□□□□□ -1.91
HCN1O60741 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.09□□□□□ -1.91
HCN1O60741 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.09□□□□□ -1.91
HCN1O60741 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HCN1O60741 AC091946.2-201ENST00000606105 291 ntBASIC3.09□□□□□ -1.91
HCN1O60741 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.09□□□□□ -1.91
HCN1O60741 AL391834.2-201ENST00000609982 546 ntBASIC3.09□□□□□ -1.91
HCN1O60741 AL442067.2-201ENST00000614033 363 ntBASIC3.09□□□□□ -1.91
HCN1O60741 AC008083.4-201ENST00000615076 444 ntBASIC3.09□□□□□ -1.91
HCN1O60741 AC073968.1-201ENST00000618594 637 ntBASIC3.09□□□□□ -1.91
HCN1O60741 AC010975.3-201ENST00000618727 978 ntBASIC3.09□□□□□ -1.91
HCN1O60741 AC009318.4-201ENST00000620496 486 ntBASIC3.09□□□□□ -1.91
HCN1O60741 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.09□□□□□ -1.91
HCN1O60741 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HCN1O60741 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.09□□□□□ -1.92
HCN1O60741 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.09□□□□□ -1.92
HCN1O60741 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HCN1O60741 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.08□□□□□ -1.92
HCN1O60741 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HCN1O60741 AP005901.5-201ENST00000545779 1796 ntBASIC3.08□□□□□ -1.92
HCN1O60741 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HCN1O60741 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.08□□□□□ -1.92
HCN1O60741 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HCN1O60741 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HCN1O60741 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HCN1O60741 SNORA38.1-201ENST00000364172 131 ntBASIC3.08□□□□□ -1.92
HCN1O60741 SNORD82-201ENST00000365530 70 ntBASIC3.08□□□□□ -1.92
HCN1O60741 SUGT1P1-201ENST00000379514 476 ntBASIC3.08□□□□□ -1.92
HCN1O60741 MIR122-201ENST00000385044 85 ntBASIC3.08□□□□□ -1.92
HCN1O60741 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.08□□□□□ -1.92
HCN1O60741 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.08□□□□□ -1.92
HCN1O60741 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.08□□□□□ -1.92
HCN1O60741 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.08□□□□□ -1.92
HCN1O60741 HSPE1P1-201ENST00000421494 318 ntBASIC3.08□□□□□ -1.92
HCN1O60741 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.08□□□□□ -1.92
HCN1O60741 DPRXP1-201ENST00000426312 460 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms