Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA3O60609 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA3O60609 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.9□□□□□ -1.46
GFRA3O60609 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA3O60609 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA3O60609 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.9□□□□□ -1.46
GFRA3O60609 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
GFRA3O60609 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA3O60609 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC5.9□□□□□ -1.46
GFRA3O60609 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
GFRA3O60609 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA3O60609 AC006213.6-201ENST00000623722 4179 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 XIAPP3-201ENST00000312918 795 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 MIR450A1-201ENST00000362262 91 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 RNU6-227P-201ENST00000362865 103 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 Y_RNA.182-201ENST00000363880 111 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 RNU6-899P-201ENST00000363947 107 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 RNU6-946P-201ENST00000383878 107 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 RNU6-444P-201ENST00000383988 108 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 RNU6-245P-201ENST00000384020 107 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 AL160275.2-201ENST00000412010 394 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 RPL36P18-201ENST00000419316 318 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.9□□□□□ -1.46
GFRA3O60609 AIMP1P2-201ENST00000425294 312 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 CYCSP12-201ENST00000437729 300 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 IGKV1OR22-5-201ENST00000458718 354 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 RPS17P15-201ENST00000475609 349 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 AL160314.1-201ENST00000490836 438 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 RNU6-488P-201ENST00000515918 99 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 PRPF19P1-201ENST00000584766 898 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 AC062037.1-201ENST00000605302 128 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 AL596245.1-201ENST00000618994 362 ntBASIC5.9□□□□□ -1.46
GFRA3O60609 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.9□□□□□ -1.46
GFRA3O60609 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.9□□□□□ -1.46
GFRA3O60609 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA3O60609 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
GFRA3O60609 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
GFRA3O60609 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.9□□□□□ -1.47
GFRA3O60609 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
GFRA3O60609 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
GFRA3O60609 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
GFRA3O60609 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
GFRA3O60609 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
GFRA3O60609 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.9□□□□□ -1.47
GFRA3O60609 PANDAR-201ENST00000629595 1506 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
GFRA3O60609 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA3O60609 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA3O60609 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA3O60609 AC008555.8-201ENST00000623602 2168 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA3O60609 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA3O60609 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA3O60609 Y_RNA.558-201ENST00000384685 113 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
GFRA3O60609 MIR190B-201ENST00000401119 79 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 RNA5SP111-201ENST00000411386 101 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 RPL17P36-201ENST00000420302 549 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 AL358453.1-201ENST00000422522 250 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.89□□□□□ -1.47
GFRA3O60609 AC109327.2-201ENST00000448339 378 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 AC016027.4-201ENST00000450866 277 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 RPS11P1-201ENST00000451072 473 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 U8.22-201ENST00000459141 133 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.89□□□□□ -1.47
GFRA3O60609 AC114728.1-201ENST00000488289 483 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 AC016065.2-201ENST00000514530 444 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA3O60609 AC090049.2-201ENST00000550377 109 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 DPPA3P2-201ENST00000553589 478 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 ATP5J2P6-201ENST00000565203 266 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 AC090615.1-201ENST00000577519 154 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 MIR3934-201ENST00000579806 107 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 AP002799.1-201ENST00000623552 423 ntBASIC5.89□□□□□ -1.47
GFRA3O60609 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA3O60609 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA3O60609 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA3O60609 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA3O60609 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA3O60609 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA3O60609 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA3O60609 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.89□□□□□ -1.47
GFRA3O60609 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA3O60609 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
GFRA3O60609 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC5.89□□□□□ -1.47
GFRA3O60609 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA3O60609 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GFRA3O60609 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.89□□□□□ -1.47
GFRA3O60609 AL139384.2-201ENST00000613809 3590 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA3O60609 AC132219.2-201ENST00000624416 2327 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
GFRA3O60609 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA3O60609 AC022905.1-201ENST00000503430 3048 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.88□□□□□ -1.47
GFRA3O60609 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
GFRA3O60609 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA3O60609 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.88□□□□□ -1.47
GFRA3O60609 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.88□□□□□ -1.47
GFRA3O60609 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms