Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.53□□□□□ -1.84
PRKNO60260 AC083760.1-201ENST00000589621 670 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AC068790.6-201ENST00000602558 258 ntBASIC3.53□□□□□ -1.84
PRKNO60260 BBIP1P1-201ENST00000602999 279 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AL139395.1-201ENST00000603662 160 ntBASIC3.53□□□□□ -1.84
PRKNO60260 PRELID3BP8-201ENST00000604148 295 ntBASIC3.53□□□□□ -1.84
PRKNO60260 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRKNO60260 AC005344.1-201ENST00000613391 459 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AC027807.2-201ENST00000616099 408 ntBASIC3.53□□□□□ -1.84
PRKNO60260 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AC009509.4-201ENST00000619202 509 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AC233309.1-201ENST00000619522 751 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.53□□□□□ -1.84
PRKNO60260 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
PRKNO60260 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.53□□□□□ -1.84
PRKNO60260 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
PRKNO60260 AC097504.1-201ENST00000515103 2415 ntBASIC3.53□□□□□ -1.84
PRKNO60260 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRKNO60260 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRKNO60260 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRKNO60260 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.52□□□□□ -1.85
PRKNO60260 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.52□□□□□ -1.85
PRKNO60260 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKNO60260 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.52□□□□□ -1.85
PRKNO60260 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PRKNO60260 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.52□□□□□ -1.85
PRKNO60260 Y_RNA.505-201ENST00000384489 102 ntBASIC3.52□□□□□ -1.85
PRKNO60260 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PRKNO60260 RPL31P1-201ENST00000398116 372 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AL663109.1-201ENST00000411498 844 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKNO60260 RAB9AP3-201ENST00000412737 573 ntBASIC3.52□□□□□ -1.85
PRKNO60260 RPS7P13-201ENST00000413955 498 ntBASIC3.52□□□□□ -1.85
PRKNO60260 CDK8P2-201ENST00000415020 547 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AC004552.1-201ENST00000419089 348 ntBASIC3.52□□□□□ -1.85
PRKNO60260 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.52□□□□□ -1.85
PRKNO60260 AL591419.1-201ENST00000427423 339 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AC007389.2-201ENST00000434630 306 ntBASIC3.52□□□□□ -1.85
PRKNO60260 MTND1P28-201ENST00000435623 950 ntBASIC3.52□□□□□ -1.85
PRKNO60260 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.52□□□□□ -1.85
PRKNO60260 AC239367.2-201ENST00000447309 705 ntBASIC3.52□□□□□ -1.85
PRKNO60260 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.52□□□□□ -1.85
PRKNO60260 RAB9AP1-201ENST00000449393 573 ntBASIC3.52□□□□□ -1.85
PRKNO60260 USP9YP34-201ENST00000453983 808 ntBASIC3.52□□□□□ -1.85
PRKNO60260 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.52□□□□□ -1.85
PRKNO60260 PABPC1P3-201ENST00000469174 459 ntBASIC3.52□□□□□ -1.85
PRKNO60260 RPS26P3-201ENST00000470205 348 ntBASIC3.52□□□□□ -1.85
PRKNO60260 RPL31P50-201ENST00000471002 296 ntBASIC3.52□□□□□ -1.85
PRKNO60260 ACTR3P3-201ENST00000480448 893 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AC090543.2-201ENST00000483963 348 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AC004057.1-201ENST00000485827 348 ntBASIC3.52□□□□□ -1.85
PRKNO60260 TRBV12-2-201ENST00000489763 344 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AC106872.3-201ENST00000495104 446 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.52□□□□□ -1.85
PRKNO60260 AC021678.1-201ENST00000505195 936 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.52□□□□□ -1.85
PRKNO60260 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKNO60260 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.52□□□□□ -1.85
PRKNO60260 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKNO60260 AC022861.1-201ENST00000522981 663 ntBASIC3.52□□□□□ -1.85
PRKNO60260 HSPA8P13-201ENST00000523715 472 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRKNO60260 PTP4A1P6-201ENST00000531034 478 ntBASIC3.52□□□□□ -1.85
PRKNO60260 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.52□□□□□ -1.85
PRKNO60260 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.52□□□□□ -1.85
PRKNO60260 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRKNO60260 MIR544B-201ENST00000582372 78 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.52□□□□□ -1.85
PRKNO60260 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.52□□□□□ -1.85
PRKNO60260 AC078795.2-201ENST00000602835 1252 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AP000403.1-201ENST00000603349 851 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AL513477.2-201ENST00000607858 568 ntBASIC3.52□□□□□ -1.85
PRKNO60260 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AC026585.1-201ENST00000619582 524 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AC099842.1-201ENST00000619919 596 ntBASIC3.52□□□□□ -1.85
PRKNO60260 AL392088.2-201ENST00000637607 285 ntBASIC3.52□□□□□ -1.85
PRKNO60260 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRKNO60260 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.52□□□□□ -1.85
PRKNO60260 AP004289.2-201ENST00000444413 1457 ntBASIC3.52□□□□□ -1.85
PRKNO60260 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRKNO60260 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PRKNO60260 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
PRKNO60260 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRKNO60260 IPO8P1-201ENST00000455509 3109 ntBASIC3.51□□□□□ -1.85
PRKNO60260 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PRKNO60260 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.51□□□□□ -1.85
PRKNO60260 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PRKNO60260 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.51□□□□□ -1.85
PRKNO60260 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.51□□□□□ -1.85
PRKNO60260 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
PRKNO60260 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PRKNO60260 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PRKNO60260 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PRKNO60260 MIR448-201ENST00000362131 111 ntBASIC3.51□□□□□ -1.85
PRKNO60260 RNU4-91P-201ENST00000364778 135 ntBASIC3.51□□□□□ -1.85
PRKNO60260 SNORD82-201ENST00000365530 70 ntBASIC3.51□□□□□ -1.85
PRKNO60260 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.51□□□□□ -1.85
PRKNO60260 RNU6ATAC-201ENST00000408749 126 ntBASIC3.51□□□□□ -1.85
PRKNO60260 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.51□□□□□ -1.85
PRKNO60260 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms