Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSX4O60224 PGBD4P8-201ENST00000412993 562 ntBASIC3.57□□□□□ -1.84
SSX4O60224 RPS7P15-201ENST00000415804 584 ntBASIC3.57□□□□□ -1.84
SSX4O60224 RAD23BP2-201ENST00000416003 1207 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AL389915.1-201ENST00000422463 466 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX4O60224 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX4O60224 AC096638.2-201ENST00000434965 711 ntBASIC3.57□□□□□ -1.84
SSX4O60224 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSX4O60224 AL831737.1-201ENST00000441288 271 ntBASIC3.57□□□□□ -1.84
SSX4O60224 UBE2D3P4-201ENST00000441973 436 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX4O60224 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX4O60224 AC091564.1-201ENST00000464563 479 ntBASIC3.57□□□□□ -1.84
SSX4O60224 MTND3P7-201ENST00000474435 343 ntBASIC3.57□□□□□ -1.84
SSX4O60224 RPS29P19-201ENST00000479709 171 ntBASIC3.57□□□□□ -1.84
SSX4O60224 VN1R105P-201ENST00000486595 910 ntBASIC3.57□□□□□ -1.84
SSX4O60224 RPS4XP15-201ENST00000489210 795 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AC106872.3-201ENST00000495104 446 ntBASIC3.57□□□□□ -1.84
SSX4O60224 OR2A20P-203ENST00000498397 1268 ntBASIC3.57□□□□□ -1.84
SSX4O60224 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSX4O60224 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AC010460.1-201ENST00000507087 466 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AC026726.1-201ENST00000512859 601 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AC108064.1-201ENST00000513791 460 ntBASIC3.57□□□□□ -1.84
SSX4O60224 SNORA31.20-201ENST00000517111 133 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX4O60224 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.57□□□□□ -1.84
SSX4O60224 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSX4O60224 AP004247.1-201ENST00000531556 1289 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AC013828.2-201ENST00000532487 235 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.57□□□□□ -1.84
SSX4O60224 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
SSX4O60224 AC087481.2-201ENST00000565492 330 ntBASIC3.57□□□□□ -1.84
SSX4O60224 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX4O60224 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSX4O60224 MIR3915-201ENST00000578518 97 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX4O60224 AP001004.1-201ENST00000582468 324 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AC053481.4-201ENST00000583164 216 ntBASIC3.57□□□□□ -1.84
SSX4O60224 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX4O60224 WISP1-OT1-201ENST00000602893 642 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AC121247.2-201ENST00000604776 136 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AC114878.2-201ENST00000604863 1251 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AC103710.3-201ENST00000608157 948 ntBASIC3.57□□□□□ -1.84
SSX4O60224 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AC006133.1-201ENST00000617106 264 ntBASIC3.57□□□□□ -1.84
SSX4O60224 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSX4O60224 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX4O60224 AC091931.1-201ENST00000623488 728 ntBASIC3.57□□□□□ -1.84
SSX4O60224 AC244205.2-202ENST00000635781 342 ntBASIC3.57□□□□□ -1.84
SSX4O60224 MIR3974-201ENST00000637126 96 ntBASIC3.57□□□□□ -1.84
SSX4O60224 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX4O60224 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSX4O60224 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSX4O60224 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SSX4O60224 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SSX4O60224 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX4O60224 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
SSX4O60224 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSX4O60224 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSX4O60224 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.56□□□□□ -1.84
SSX4O60224 CR383658.2-201ENST00000547576 1525 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AL445523.1-201ENST00000451184 1362 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AL021368.2-201ENST00000606125 5352 ntBASIC3.56□□□□□ -1.84
SSX4O60224 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSX4O60224 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX4O60224 RNU6-1207P-201ENST00000384343 107 ntBASIC3.56□□□□□ -1.84
SSX4O60224 Y_RNA.548-201ENST00000384656 105 ntBASIC3.56□□□□□ -1.84
SSX4O60224 MIR670-201ENST00000390142 98 ntBASIC3.56□□□□□ -1.84
SSX4O60224 RNU11-4P-201ENST00000391149 133 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AL356421.1-201ENST00000403255 413 ntBASIC3.56□□□□□ -1.84
SSX4O60224 MTCO1P17-201ENST00000411522 491 ntBASIC3.56□□□□□ -1.84
SSX4O60224 CYCSP19-201ENST00000411715 316 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX4O60224 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX4O60224 RSU1P2-202ENST00000437884 485 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.56□□□□□ -1.84
SSX4O60224 AP000542.1-201ENST00000448473 371 ntBASIC3.56□□□□□ -1.84
SSX4O60224 ZNF114P1-201ENST00000453500 292 ntBASIC3.56□□□□□ -1.84
SSX4O60224 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSX4O60224 AC092451.1-201ENST00000480211 153 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AP001025.2-201ENST00000490908 477 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AP002812.1-201ENST00000495378 474 ntBASIC3.56□□□□□ -1.84
SSX4O60224 HMGB1P22-201ENST00000505315 124 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AC022447.3-201ENST00000506865 495 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX4O60224 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.56□□□□□ -1.84
SSX4O60224 NPM1P41-201ENST00000512920 831 ntBASIC3.56□□□□□ -1.84
SSX4O60224 RNU6-1095P-201ENST00000516148 108 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AC068587.4-201ENST00000533893 186 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX4O60224 CR383656.7-201ENST00000548164 174 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX4O60224 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX4O60224 AL121576.1-201ENST00000556055 276 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX4O60224 MIR544B-201ENST00000582372 78 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AL606490.9-201ENST00000603331 271 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AC012531.5-201ENST00000611375 151 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms