Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
LDB2O43679 RNU6-517P-201ENST00000384362 110 ntBASIC3.9□□□□□ -1.79
LDB2O43679 MIR199A2-201ENST00000385289 110 ntBASIC3.9□□□□□ -1.79
LDB2O43679 RPL32P23-201ENST00000397237 405 ntBASIC3.9□□□□□ -1.79
LDB2O43679 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDB2O43679 RN7SKP202-201ENST00000410439 330 ntBASIC3.9□□□□□ -1.79
LDB2O43679 HMGN1P14-201ENST00000412459 517 ntBASIC3.9□□□□□ -1.79
LDB2O43679 Z97055.1-201ENST00000419730 712 ntBASIC3.9□□□□□ -1.79
LDB2O43679 SAGE2P-201ENST00000420011 2126 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.9□□□□□ -1.79
LDB2O43679 AL391219.1-201ENST00000422570 483 ntBASIC3.9□□□□□ -1.79
LDB2O43679 RPL30P3-201ENST00000424262 333 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.9□□□□□ -1.79
LDB2O43679 AC010975.2-201ENST00000427781 588 ntBASIC3.9□□□□□ -1.79
LDB2O43679 NPM1P34-201ENST00000428821 893 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AC109583.1-201ENST00000432156 268 ntBASIC3.9□□□□□ -1.79
LDB2O43679 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LDB2O43679 AL356535.1-201ENST00000440335 398 ntBASIC3.9□□□□□ -1.79
LDB2O43679 PDSS1P2-201ENST00000449397 678 ntBASIC3.9□□□□□ -1.79
LDB2O43679 SNORD42A-201ENST00000459584 64 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AC069499.1-201ENST00000489433 509 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AC096751.1-202ENST00000502691 1067 ntBASIC3.9□□□□□ -1.79
LDB2O43679 RNF138P1-201ENST00000502765 546 ntBASIC3.9□□□□□ -1.79
LDB2O43679 MTND2P33-201ENST00000506452 1031 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AC010460.1-201ENST00000507087 466 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AF213884.2-201ENST00000510417 903 ntBASIC3.9□□□□□ -1.79
LDB2O43679 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LDB2O43679 PAICSP4-201ENST00000517543 1253 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.9□□□□□ -1.79
LDB2O43679 OR5AP1P-201ENST00000529730 940 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.9□□□□□ -1.79
LDB2O43679 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.9□□□□□ -1.79
LDB2O43679 AC074050.1-201ENST00000563247 211 ntBASIC3.9□□□□□ -1.79
LDB2O43679 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.9□□□□□ -1.79
LDB2O43679 AP001180.3-201ENST00000582221 145 ntBASIC3.9□□□□□ -1.79
LDB2O43679 MIR4307-201ENST00000582802 84 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AL606490.9-201ENST00000603331 271 ntBASIC3.9□□□□□ -1.79
LDB2O43679 SEPT7P9-203ENST00000604116 343 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AC010680.3-201ENST00000604215 520 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AC008498.1-201ENST00000613012 531 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.9□□□□□ -1.79
LDB2O43679 MIR6500-201ENST00000622700 86 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AL603839.4-201ENST00000624658 1005 ntBASIC3.9□□□□□ -1.79
LDB2O43679 CYP3A51P-201ENST00000633513 256 ntBASIC3.9□□□□□ -1.79
LDB2O43679 CRYM-AS1-204ENST00000637983 556 ntBASIC3.9□□□□□ -1.79
LDB2O43679 AC090229.1-201ENST00000590983 1609 ntBASIC3.9□□□□□ -1.79
LDB2O43679 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDB2O43679 FAM91A3P-201ENST00000456826 2544 ntBASIC3.9□□□□□ -1.79
LDB2O43679 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.9□□□□□ -1.79
LDB2O43679 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.9□□□□□ -1.79
LDB2O43679 OR11H5P-202ENST00000641612 1325 ntBASIC3.9□□□□□ -1.79
LDB2O43679 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDB2O43679 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDB2O43679 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LDB2O43679 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
LDB2O43679 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LDB2O43679 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LDB2O43679 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LDB2O43679 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LDB2O43679 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
LDB2O43679 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LDB2O43679 Y_RNA.6-201ENST00000362350 114 ntBASIC3.89□□□□□ -1.79
LDB2O43679 AL359837.1-201ENST00000381357 287 ntBASIC3.89□□□□□ -1.79
LDB2O43679 AL031679.1-201ENST00000400616 525 ntBASIC3.89□□□□□ -1.79
LDB2O43679 UBE2V1P10-201ENST00000414685 269 ntBASIC3.89□□□□□ -1.79
LDB2O43679 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 RPS29P7-201ENST00000439662 171 ntBASIC3.89□□□□□ -1.79
LDB2O43679 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LDB2O43679 GDI2P2-201ENST00000445131 608 ntBASIC3.89□□□□□ -1.79
LDB2O43679 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.89□□□□□ -1.79
LDB2O43679 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.89□□□□□ -1.79
LDB2O43679 OR6K1P-201ENST00000456766 971 ntBASIC3.89□□□□□ -1.79
LDB2O43679 SNORA84-201ENST00000459229 133 ntBASIC3.89□□□□□ -1.79
LDB2O43679 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.89□□□□□ -1.79
LDB2O43679 RPS20P21-201ENST00000466859 343 ntBASIC3.89□□□□□ -1.79
LDB2O43679 PPIAP15-201ENST00000479662 484 ntBASIC3.89□□□□□ -1.79
LDB2O43679 AC107401.1-201ENST00000503426 685 ntBASIC3.89□□□□□ -1.79
LDB2O43679 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.89□□□□□ -1.79
LDB2O43679 AF131216.2-201ENST00000512316 564 ntBASIC3.89□□□□□ -1.79
LDB2O43679 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.89□□□□□ -1.79
LDB2O43679 AC022861.1-201ENST00000522981 663 ntBASIC3.89□□□□□ -1.79
LDB2O43679 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.89□□□□□ -1.79
LDB2O43679 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
LDB2O43679 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 AC090877.1-201ENST00000561418 344 ntBASIC3.89□□□□□ -1.79
LDB2O43679 MIR4528-201ENST00000577763 90 ntBASIC3.89□□□□□ -1.79
LDB2O43679 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.89□□□□□ -1.79
LDB2O43679 MIR5697-201ENST00000578045 78 ntBASIC3.89□□□□□ -1.79
LDB2O43679 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.89□□□□□ -1.79
LDB2O43679 AC053481.4-201ENST00000583164 216 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms