Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.68□□□□□ -1.66
PRPF3O43395 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.68□□□□□ -1.66
PRPF3O43395 AC074050.1-201ENST00000563247 211 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.68□□□□□ -1.66
PRPF3O43395 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.68□□□□□ -1.66
PRPF3O43395 AC103987.3-201ENST00000582071 292 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.68□□□□□ -1.66
PRPF3O43395 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF3O43395 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF3O43395 RMST_9.1-201ENST00000619945 193 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF3O43395 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF3O43395 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF3O43395 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.67□□□□□ -1.66
PRPF3O43395 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF3O43395 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PRPF3O43395 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PRPF3O43395 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PRPF3O43395 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF3O43395 MTCYBP36-201ENST00000404146 440 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 RNA5SP317-201ENST00000410176 116 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 Y_RNA.608-201ENST00000410647 95 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 RNA5SP311-201ENST00000411290 116 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 AC007899.1-201ENST00000412776 775 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 RAD23BP2-201ENST00000416003 1207 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF3O43395 AC004552.1-201ENST00000419089 348 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.67□□□□□ -1.66
PRPF3O43395 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF3O43395 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF3O43395 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.67□□□□□ -1.66
PRPF3O43395 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF3O43395 AL590365.1-201ENST00000450788 243 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 FABP3P2-201ENST00000453169 399 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 RPL5P32-201ENST00000454085 879 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 SNORD42A-201ENST00000459584 64 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 RPS26P3-201ENST00000470205 348 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.67□□□□□ -1.66
PRPF3O43395 AC090543.2-201ENST00000483963 348 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 AC004057.1-201ENST00000485827 348 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 AC078918.1-201ENST00000498515 228 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.67□□□□□ -1.66
PRPF3O43395 AC004069.2-201ENST00000505438 1114 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 CBX3P3-201ENST00000508108 532 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF3O43395 RNA5SP315-201ENST00000516340 116 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 RNU6-528P-201ENST00000516926 100 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 RNA5SP312-201ENST00000517068 116 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.67□□□□□ -1.66
PRPF3O43395 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF3O43395 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF3O43395 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF3O43395 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.67□□□□□ -1.66
PRPF3O43395 AC012414.6-201ENST00000568241 401 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 MIR5697-201ENST00000578045 78 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 MIR3682-201ENST00000581338 84 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 BNIP3P8-201ENST00000597863 560 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 AC112191.3-201ENST00000604371 277 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 AC092354.2-201ENST00000607786 514 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 AC239868.4-201ENST00000608318 671 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 MIR6868-201ENST00000611215 58 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF3O43395 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 AC112484.5-201ENST00000624189 228 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 AL773545.4-201ENST00000637262 310 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 AC244258.1-201ENST00000637553 1071 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 AL513478.4-201ENST00000641636 310 ntBASIC4.67□□□□□ -1.66
PRPF3O43395 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF3O43395 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF3O43395 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF3O43395 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PRPF3O43395 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF3O43395 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF3O43395 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF3O43395 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF3O43395 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF3O43395 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PRPF3O43395 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF3O43395 RNU6-223P-201ENST00000362830 107 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 RNU6-1155P-201ENST00000363554 107 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 Y_RNA.194-201ENST00000363985 102 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 RNU6-1078P-201ENST00000364522 103 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 RNA5SP167-201ENST00000365461 116 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PRPF3O43395 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF3O43395 RNU2-8P-201ENST00000410727 190 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF3O43395 AC092447.6-201ENST00000414578 210 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF3O43395 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.66□□□□□ -1.66
PRPF3O43395 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF3O43395 AL353777.1-201ENST00000425552 326 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.66□□□□□ -1.66
PRPF3O43395 AL353706.1-201ENST00000436728 494 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF3O43395 AC092641.1-201ENST00000440229 772 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF3O43395 AL033528.1-201ENST00000453780 140 ntBASIC4.66□□□□□ -1.66
PRPF3O43395 AC234775.1-201ENST00000454247 670 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms