Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AL049745.1-201ENST00000433953 286 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXA3O43365 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA3O43365 HMGB3P21-201ENST00000452483 547 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA3O43365 SNORD19B-201ENST00000459623 84 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA3O43365 AC083904.1-201ENST00000487828 231 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 AC091912.1-201ENST00000511351 248 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 SCARNA20.4-201ENST00000516969 131 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 RN7SKP234-201ENST00000517173 224 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 MYL12AP1-201ENST00000518490 515 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.18□□□□□ -1.74
HOXA3O43365 AP005639.2-201ENST00000527592 928 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA3O43365 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXA3O43365 EDDM3DP-201ENST00000554692 434 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 AL118558.2-201ENST00000556294 238 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.18□□□□□ -1.74
HOXA3O43365 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA3O43365 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA3O43365 AL022099.1-201ENST00000604551 712 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 AC012443.1-201ENST00000605605 231 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 uc_338.15-201ENST00000615470 191 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 uc_338.34-201ENST00000617467 174 ntBASIC4.18□□□□□ -1.74
HOXA3O43365 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA3O43365 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA3O43365 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HOXA3O43365 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA3O43365 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXA3O43365 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
HOXA3O43365 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA3O43365 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA3O43365 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXA3O43365 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA3O43365 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA3O43365 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA3O43365 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXA3O43365 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA3O43365 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.18□□□□□ -1.74
HOXA3O43365 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HOXA3O43365 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA3O43365 ABCC13-202ENST00000463099 3842 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA3O43365 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HOXA3O43365 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA3O43365 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA3O43365 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA3O43365 MTND5P3-201ENST00000438536 1800 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA3O43365 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA3O43365 U3.12-201ENST00000364498 214 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 Y_RNA.259-201ENST00000364619 101 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 RNA5SP90-201ENST00000364801 99 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 Y_RNA.378-201ENST00000365652 113 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA3O43365 Y_RNA.530-201ENST00000384587 101 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HOXA3O43365 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HOXA3O43365 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA3O43365 MIR1182-201ENST00000408363 97 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 BX323014.1-201ENST00000412876 237 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 UBE2FP1-201ENST00000416536 447 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 DDX39BP1-205ENST00000422507 192 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 AC005517.2-201ENST00000424673 553 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 AL360081.1-201ENST00000428299 555 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA3O43365 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA3O43365 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA3O43365 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA3O43365 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA3O43365 PRPS1P1-201ENST00000445305 876 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA3O43365 AC007967.1-201ENST00000455422 1159 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 RN7SL189P-201ENST00000468631 289 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 MTND4P17-201ENST00000470444 350 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA3O43365 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA3O43365 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 SNORD116-26-201ENST00000516006 96 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 RNU6-1092P-201ENST00000516955 87 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 HIGD1AP5-201ENST00000529959 259 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 AC107918.3-201ENST00000533272 382 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA3O43365 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA3O43365 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA3O43365 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 AC009962.1-201ENST00000567327 3813 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms