Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
PHGDHO43175 KC877982.1-201ENST00000602313 470 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 AP001429.1-201ENST00000602568 530 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 AL139395.1-201ENST00000603662 160 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 MIR98-201ENST00000606724 119 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.32□□□□□ -1.72
PHGDHO43175 AC007546.1-201ENST00000619452 559 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 AL138713.1-201ENST00000624026 2130 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 SEPT14P19-203ENST00000633205 211 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 AC244258.1-201ENST00000637553 1071 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 OR5H6-203ENST00000642105 978 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PHGDHO43175 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
PHGDHO43175 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PHGDHO43175 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PHGDHO43175 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PHGDHO43175 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
PHGDHO43175 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PHGDHO43175 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.31□□□□□ -1.72
PHGDHO43175 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PHGDHO43175 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PHGDHO43175 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.31□□□□□ -1.72
PHGDHO43175 SNORD74.4-201ENST00000364129 80 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 MIR513A2-201ENST00000385249 127 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 GSTA9P-201ENST00000406231 611 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.31□□□□□ -1.72
PHGDHO43175 AL359265.2-201ENST00000434367 631 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.31□□□□□ -1.72
PHGDHO43175 AL353748.1-201ENST00000440753 474 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.31□□□□□ -1.72
PHGDHO43175 AC079448.1-201ENST00000449377 373 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 AC108059.3-201ENST00000456388 214 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 AL359385.1-201ENST00000456509 365 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 AC093278.1-201ENST00000494700 600 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 AC114967.1-201ENST00000504890 259 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 AP004371.1-201ENST00000525240 214 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.31□□□□□ -1.72
PHGDHO43175 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PHGDHO43175 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.31□□□□□ -1.72
PHGDHO43175 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.31□□□□□ -1.72
PHGDHO43175 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.31□□□□□ -1.72
PHGDHO43175 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.31□□□□□ -1.72
PHGDHO43175 MIR4480-201ENST00000582492 71 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.31□□□□□ -1.72
PHGDHO43175 AL158209.2-201ENST00000619266 216 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 AC073534.2-201ENST00000620377 381 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.31□□□□□ -1.72
PHGDHO43175 LRRC77P-213ENST00000637727 880 ntBASIC4.31□□□□□ -1.72
PHGDHO43175 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.31□□□□□ -1.72
PHGDHO43175 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PHGDHO43175 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PHGDHO43175 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHGDHO43175 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHGDHO43175 AL592182.3-201ENST00000642132 3304 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.3□□□□□ -1.72
PHGDHO43175 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PHGDHO43175 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHGDHO43175 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PHGDHO43175 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHGDHO43175 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.3□□□□□ -1.72
PHGDHO43175 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.3□□□□□ -1.72
PHGDHO43175 RNU6-637P-201ENST00000384050 107 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 RNU6-432P-201ENST00000384196 109 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 SNORD3H-201ENST00000384486 214 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 MIR135A2-201ENST00000384854 100 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 AC099677.1-201ENST00000420575 175 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.3□□□□□ -1.72
PHGDHO43175 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.3□□□□□ -1.72
PHGDHO43175 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.3□□□□□ -1.72
PHGDHO43175 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.3□□□□□ -1.72
PHGDHO43175 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.3□□□□□ -1.72
PHGDHO43175 FABP3P2-201ENST00000453169 399 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 MTND1P12-201ENST00000455231 147 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 DHFRP3-201ENST00000455595 559 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 RNU7-59P-201ENST00000459101 61 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 RPL35AP28-201ENST00000459730 331 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 RPS3AP50-201ENST00000487064 803 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 RPL7P23-201ENST00000493874 747 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 AC108078.1-201ENST00000508073 725 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 FTH1P21-201ENST00000512179 511 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.3□□□□□ -1.72
PHGDHO43175 IFITM8P-201ENST00000522529 394 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 OR5G4P-201ENST00000525251 760 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.3□□□□□ -1.72
PHGDHO43175 AP000857.1-201ENST00000532151 543 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 AC018630.1-201ENST00000541376 925 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.3□□□□□ -1.72
PHGDHO43175 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.3□□□□□ -1.72
PHGDHO43175 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.3□□□□□ -1.72
PHGDHO43175 AC136619.2-201ENST00000563361 631 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.3□□□□□ -1.72
PHGDHO43175 AP001094.1-201ENST00000579805 193 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.3□□□□□ -1.72
PHGDHO43175 AC079587.1-201ENST00000603846 277 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 AL354984.3-201ENST00000604803 325 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 AC024940.4-201ENST00000605507 246 ntBASIC4.3□□□□□ -1.72
PHGDHO43175 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.3□□□□□ -1.72
PHGDHO43175 Mico1.1-201ENST00000611698 204 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms