Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.39□□□□□ -1.87
CHD1O14646 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.39□□□□□ -1.87
CHD1O14646 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.39□□□□□ -1.87
CHD1O14646 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CHD1O14646 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHD1O14646 MIR9-3-201ENST00000385084 90 ntBASIC3.39□□□□□ -1.87
CHD1O14646 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.39□□□□□ -1.87
CHD1O14646 AL445685.2-201ENST00000422551 342 ntBASIC3.39□□□□□ -1.87
CHD1O14646 AC004263.1-201ENST00000479327 332 ntBASIC3.39□□□□□ -1.87
CHD1O14646 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.39□□□□□ -1.87
CHD1O14646 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.39□□□□□ -1.87
CHD1O14646 POU5F1P7-201ENST00000508759 541 ntBASIC3.39□□□□□ -1.87
CHD1O14646 MTND5P21-201ENST00000531961 522 ntBASIC3.39□□□□□ -1.87
CHD1O14646 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.39□□□□□ -1.87
CHD1O14646 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.39□□□□□ -1.87
CHD1O14646 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.39□□□□□ -1.87
CHD1O14646 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.39□□□□□ -1.87
CHD1O14646 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.38□□□□□ -1.87
CHD1O14646 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHD1O14646 RPS15AP6-201ENST00000420703 385 ntBASIC3.38□□□□□ -1.87
CHD1O14646 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.38□□□□□ -1.87
CHD1O14646 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.38□□□□□ -1.87
CHD1O14646 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.38□□□□□ -1.87
CHD1O14646 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.37□□□□□ -1.87
CHD1O14646 AC008173.1-201ENST00000418901 264 ntBASIC3.37□□□□□ -1.87
CHD1O14646 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.37□□□□□ -1.87
CHD1O14646 AC010546.1-201ENST00000569391 485 ntBASIC3.37□□□□□ -1.87
CHD1O14646 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.37□□□□□ -1.87
CHD1O14646 AC000123.2-201ENST00000623124 461 ntBASIC3.37□□□□□ -1.87
CHD1O14646 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.37□□□□□ -1.87
CHD1O14646 Y_RNA.224-201ENST00000364308 111 ntBASIC3.36□□□□□ -1.87
CHD1O14646 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHD1O14646 AP000275.1-201ENST00000411943 390 ntBASIC3.36□□□□□ -1.87
CHD1O14646 MTCO3P21-201ENST00000430791 643 ntBASIC3.36□□□□□ -1.87
CHD1O14646 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.36□□□□□ -1.87
CHD1O14646 AL049830.2-201ENST00000480072 201 ntBASIC3.36□□□□□ -1.87
CHD1O14646 AL645944.1-201ENST00000603857 493 ntBASIC3.36□□□□□ -1.87
CHD1O14646 AC106730.3-201ENST00000624568 641 ntBASIC3.36□□□□□ -1.87
CHD1O14646 U6.98-201ENST00000637157 84 ntBASIC3.36□□□□□ -1.87
CHD1O14646 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHD1O14646 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.36□□□□□ -1.87
CHD1O14646 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CHD1O14646 SNORA48.3-201ENST00000391081 134 ntBASIC3.36□□□□□ -1.87
CHD1O14646 MIR1276-201ENST00000408707 83 ntBASIC3.36□□□□□ -1.87
CHD1O14646 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.36□□□□□ -1.87
CHD1O14646 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.36□□□□□ -1.87
CHD1O14646 RPL23AP63-201ENST00000498752 471 ntBASIC3.36□□□□□ -1.87
CHD1O14646 AMZ2P1-203ENST00000565833 850 ntBASIC3.36□□□□□ -1.87
CHD1O14646 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHD1O14646 MTND5P23-201ENST00000430812 1655 ntBASIC3.35□□□□□ -1.87
CHD1O14646 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHD1O14646 AC090229.1-201ENST00000590983 1609 ntBASIC3.35□□□□□ -1.87
CHD1O14646 AL627390.1-201ENST00000396055 340 ntBASIC3.35□□□□□ -1.87
CHD1O14646 AL138787.1-202ENST00000437804 898 ntBASIC3.35□□□□□ -1.87
CHD1O14646 AL118520.1-201ENST00000450770 291 ntBASIC3.35□□□□□ -1.87
CHD1O14646 FABP5P13-201ENST00000452144 328 ntBASIC3.35□□□□□ -1.87
CHD1O14646 RPL9P33-201ENST00000484311 566 ntBASIC3.35□□□□□ -1.87
CHD1O14646 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.35□□□□□ -1.87
CHD1O14646 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD1O14646 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD1O14646 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHD1O14646 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CHD1O14646 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CHD1O14646 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.34□□□□□ -1.87
CHD1O14646 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.34□□□□□ -1.87
CHD1O14646 AC092185.1-201ENST00000491371 97 ntBASIC3.34□□□□□ -1.87
CHD1O14646 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.34□□□□□ -1.87
CHD1O14646 AC025260.1-201ENST00000548858 430 ntBASIC3.34□□□□□ -1.87
CHD1O14646 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.34□□□□□ -1.87
CHD1O14646 AP005136.1-201ENST00000579765 429 ntBASIC3.34□□□□□ -1.87
CHD1O14646 MIR3683-201ENST00000580847 82 ntBASIC3.34□□□□□ -1.87
CHD1O14646 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHD1O14646 MTND4P35-201ENST00000604257 1375 ntBASIC3.34□□□□□ -1.88
CHD1O14646 AL161431.1-201ENST00000618966 4205 ntBASIC3.34□□□□□ -1.88
CHD1O14646 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CHD1O14646 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CHD1O14646 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHD1O14646 AC010680.1-201ENST00000590024 3590 ntBASIC3.33□□□□□ -1.88
CHD1O14646 AL592437.2-201ENST00000421655 2434 ntBASIC3.33□□□□□ -1.88
CHD1O14646 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHD1O14646 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.33□□□□□ -1.88
CHD1O14646 RNY1P14-201ENST00000384426 108 ntBASIC3.33□□□□□ -1.88
CHD1O14646 PTP4A1P1-201ENST00000420539 515 ntBASIC3.33□□□□□ -1.88
CHD1O14646 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.33□□□□□ -1.88
CHD1O14646 TRAV31-201ENST00000502780 342 ntBASIC3.33□□□□□ -1.88
CHD1O14646 AC092436.3-201ENST00000511788 257 ntBASIC3.33□□□□□ -1.88
CHD1O14646 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.33□□□□□ -1.88
CHD1O14646 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.33□□□□□ -1.88
CHD1O14646 AP001542.2-201ENST00000593141 364 ntBASIC3.33□□□□□ -1.88
CHD1O14646 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.33□□□□□ -1.88
CHD1O14646 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHD1O14646 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.33□□□□□ -1.88
CHD1O14646 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CHD1O14646 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHD1O14646 AL354719.1-201ENST00000406535 843 ntBASIC3.33□□□□□ -1.88
CHD1O14646 YWHAZP7-201ENST00000436906 631 ntBASIC3.33□□□□□ -1.88
CHD1O14646 CEACAMP4-201ENST00000457676 421 ntBASIC3.33□□□□□ -1.88
CHD1O14646 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.33□□□□□ -1.88
CHD1O14646 RNA5SP309-201ENST00000516670 106 ntBASIC3.33□□□□□ -1.88
CHD1O14646 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms