Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.48□□□□□ -2.01
UBFD1O14562 HMGB1P6-201ENST00000569046 646 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
UBFD1O14562 MIR5092-201ENST00000583139 88 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 VN1R90P-201ENST00000595717 726 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
UBFD1O14562 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
UBFD1O14562 MTND4P8-201ENST00000514997 1362 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.48□□□□□ -2.01
UBFD1O14562 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.48□□□□□ -2.01
UBFD1O14562 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.48□□□□□ -2.01
UBFD1O14562 AC016716.1-201ENST00000265882 708 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 MIR6073-201ENST00000352083 89 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 SNORA51.2-201ENST00000364595 132 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 AL031679.1-201ENST00000400616 525 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 PRRC2CP1-201ENST00000404428 159 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 AC080125.1-201ENST00000414888 684 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 AC023128.2-201ENST00000420880 1223 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 AC005517.2-201ENST00000424673 553 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 Z93242.1-201ENST00000427102 353 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 PSMA2P3-201ENST00000429685 675 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
UBFD1O14562 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.47□□□□□ -2.01
UBFD1O14562 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.47□□□□□ -2.01
UBFD1O14562 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.47□□□□□ -2.01
UBFD1O14562 EEF1B2P7-201ENST00000451177 676 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 RN7SL432P-201ENST00000484057 298 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
UBFD1O14562 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.47□□□□□ -2.01
UBFD1O14562 MTND5P4-201ENST00000514978 288 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.47□□□□□ -2.01
UBFD1O14562 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
UBFD1O14562 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.47□□□□□ -2.01
UBFD1O14562 AC138761.3-201ENST00000579993 334 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.47□□□□□ -2.01
UBFD1O14562 CBX3P2-202ENST00000583365 535 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 SNRPGP15-201ENST00000600149 222 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.47□□□□□ -2.01
UBFD1O14562 MIR4496-201ENST00000635896 61 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 AC010149.2-201ENST00000637608 315 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 CRYM-AS1-204ENST00000637983 556 ntBASIC2.47□□□□□ -2.01
UBFD1O14562 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
UBFD1O14562 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.46□□□□□ -2.02
UBFD1O14562 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.46□□□□□ -2.02
UBFD1O14562 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.46□□□□□ -2.02
UBFD1O14562 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UBFD1O14562 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
UBFD1O14562 EIF5P1-201ENST00000400019 1231 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 RPS4XP8-201ENST00000402039 771 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.46□□□□□ -2.02
UBFD1O14562 HMGN2P35-201ENST00000412164 270 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 RAD23BP2-201ENST00000416003 1207 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.46□□□□□ -2.02
UBFD1O14562 AC063976.3-201ENST00000426849 329 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.46□□□□□ -2.02
UBFD1O14562 RPL7P52-201ENST00000449200 742 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.46□□□□□ -2.02
UBFD1O14562 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.46□□□□□ -2.02
UBFD1O14562 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.46□□□□□ -2.02
UBFD1O14562 AC034159.1-201ENST00000513885 583 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.46□□□□□ -2.02
UBFD1O14562 SNORD59.2-201ENST00000516873 68 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.46□□□□□ -2.02
UBFD1O14562 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.46□□□□□ -2.02
UBFD1O14562 AF279873.1-201ENST00000523393 313 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UBFD1O14562 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.46□□□□□ -2.02
UBFD1O14562 AC012414.2-201ENST00000559474 187 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.46□□□□□ -2.02
UBFD1O14562 AC060766.3-201ENST00000591442 263 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 ATP1B3P1-201ENST00000605365 821 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 AC026790.2-201ENST00000606282 430 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 AC011374.2-201ENST00000607135 526 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.46□□□□□ -2.02
UBFD1O14562 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UBFD1O14562 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
UBFD1O14562 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
UBFD1O14562 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.45□□□□□ -2.02
UBFD1O14562 FRG1BP-201ENST00000278882 761 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
UBFD1O14562 AL672167.1-206ENST00000356293 943 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 U8.8-201ENST00000365399 135 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 RNU1-109P-201ENST00000383960 147 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 AL139095.1-201ENST00000404326 391 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 VTA1P1-201ENST00000414044 866 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 AL035407.1-201ENST00000429211 571 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 TPTE2P1-204ENST00000435256 593 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 RPS12P2-201ENST00000439728 269 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 AC097499.1-201ENST00000444277 208 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 Z77249.1-201ENST00000444622 1175 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.45□□□□□ -2.02
UBFD1O14562 NF1P3-201ENST00000457709 450 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.45□□□□□ -2.02
UBFD1O14562 AC108157.1-201ENST00000510511 539 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 MTCYBP37-201ENST00000510642 1133 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 SETP12-201ENST00000514068 805 ntBASIC2.45□□□□□ -2.02
UBFD1O14562 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.45□□□□□ -2.02
UBFD1O14562 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.45□□□□□ -2.02
UBFD1O14562 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms