Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNA5SP293-201ENST00000410527 113 ntBASIC3.68□□□□□ -1.82
O00370 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.68□□□□□ -1.82
O00370 USP9YP11-201ENST00000427537 717 ntBASIC3.68□□□□□ -1.82
O00370 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.68□□□□□ -1.82
O00370 MTCO2P20-201ENST00000437339 673 ntBASIC3.68□□□□□ -1.82
O00370 RPL23AP16-201ENST00000441715 421 ntBASIC3.68□□□□□ -1.82
O00370 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.68□□□□□ -1.82
O00370 AL358232.1-201ENST00000448030 501 ntBASIC3.68□□□□□ -1.82
O00370 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.68□□□□□ -1.82
O00370 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.68□□□□□ -1.82
O00370 snoU13.3-201ENST00000459441 104 ntBASIC3.68□□□□□ -1.82
O00370 RN7SL442P-201ENST00000473804 320 ntBASIC3.68□□□□□ -1.82
O00370 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.68□□□□□ -1.82
O00370 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.68□□□□□ -1.82
O00370 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.68□□□□□ -1.82
O00370 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
O00370 SNORA31.20-201ENST00000517111 133 ntBASIC3.68□□□□□ -1.82
O00370 MRPS36P3-201ENST00000519284 130 ntBASIC3.68□□□□□ -1.82
O00370 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.68□□□□□ -1.82
O00370 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.68□□□□□ -1.82
O00370 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.68□□□□□ -1.82
O00370 SLC2A13P1-201ENST00000531560 322 ntBASIC3.68□□□□□ -1.82
O00370 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
O00370 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.68□□□□□ -1.82
O00370 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.68□□□□□ -1.82
O00370 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
O00370 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.68□□□□□ -1.82
O00370 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.68□□□□□ -1.82
O00370 SULT1C2P1-202ENST00000562418 459 ntBASIC3.68□□□□□ -1.82
O00370 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.68□□□□□ -1.82
O00370 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.68□□□□□ -1.82
O00370 AL512347.1-201ENST00000566420 503 ntBASIC3.68□□□□□ -1.82
O00370 AC012182.1-201ENST00000570133 895 ntBASIC3.68□□□□□ -1.82
O00370 AL354943.1-201ENST00000572103 781 ntBASIC3.68□□□□□ -1.82
O00370 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.68□□□□□ -1.82
O00370 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.68□□□□□ -1.82
O00370 AL031281.1-201ENST00000604049 488 ntBASIC3.68□□□□□ -1.82
O00370 DPRXP5-201ENST00000604662 539 ntBASIC3.68□□□□□ -1.82
O00370 AC006270.3-201ENST00000605967 1036 ntBASIC3.68□□□□□ -1.82
O00370 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.68□□□□□ -1.82
O00370 XIST_intron.1-201ENST00000619444 68 ntBASIC3.68□□□□□ -1.82
O00370 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.68□□□□□ -1.82
O00370 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
O00370 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
O00370 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
O00370 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
O00370 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.68□□□□□ -1.82
O00370 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
O00370 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
O00370 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.67□□□□□ -1.82
O00370 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
O00370 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.67□□□□□ -1.82
O00370 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.67□□□□□ -1.82
O00370 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
O00370 SNORA71.3-201ENST00000362582 128 ntBASIC3.67□□□□□ -1.82
O00370 RNU6-1214P-201ENST00000363650 109 ntBASIC3.67□□□□□ -1.82
O00370 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.67□□□□□ -1.82
O00370 Y_RNA.311-201ENST00000365068 96 ntBASIC3.67□□□□□ -1.82
O00370 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
O00370 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
O00370 AC068533.2-201ENST00000411872 306 ntBASIC3.67□□□□□ -1.82
O00370 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.67□□□□□ -1.82
O00370 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.67□□□□□ -1.82
O00370 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.67□□□□□ -1.82
O00370 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.67□□□□□ -1.82
O00370 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.67□□□□□ -1.82
O00370 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.67□□□□□ -1.82
O00370 RPS25P9-201ENST00000435591 252 ntBASIC3.67□□□□□ -1.82
O00370 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
O00370 AC092427.1-201ENST00000439177 601 ntBASIC3.67□□□□□ -1.82
O00370 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
O00370 AL357552.1-201ENST00000445254 415 ntBASIC3.67□□□□□ -1.82
O00370 PDSS1P2-201ENST00000449397 678 ntBASIC3.67□□□□□ -1.82
O00370 SLC31A1P1-201ENST00000451221 567 ntBASIC3.67□□□□□ -1.82
O00370 AC104073.1-201ENST00000451988 151 ntBASIC3.67□□□□□ -1.82
O00370 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
O00370 ANKRD26P4-201ENST00000455755 950 ntBASIC3.67□□□□□ -1.82
O00370 PLGLA-201ENST00000465668 449 ntBASIC3.67□□□□□ -1.82
O00370 RPL7P18-201ENST00000478965 734 ntBASIC3.67□□□□□ -1.82
O00370 AC025518.1-201ENST00000479856 347 ntBASIC3.67□□□□□ -1.82
O00370 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.67□□□□□ -1.82
O00370 RPL7P47-201ENST00000497299 556 ntBASIC3.67□□□□□ -1.82
O00370 MTCYBP17-201ENST00000503579 789 ntBASIC3.67□□□□□ -1.82
O00370 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
O00370 HMGB1P28-201ENST00000507778 552 ntBASIC3.67□□□□□ -1.82
O00370 AC004062.1-201ENST00000509926 645 ntBASIC3.67□□□□□ -1.82
O00370 AC079395.1-201ENST00000510981 262 ntBASIC3.67□□□□□ -1.82
O00370 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.67□□□□□ -1.82
O00370 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.67□□□□□ -1.82
O00370 RNU5A-4P-201ENST00000516588 111 ntBASIC3.67□□□□□ -1.82
O00370 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.67□□□□□ -1.82
O00370 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.67□□□□□ -1.82
O00370 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.67□□□□□ -1.82
O00370 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.67□□□□□ -1.82
O00370 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.67□□□□□ -1.82
O00370 OR4K7P-201ENST00000580232 945 ntBASIC3.67□□□□□ -1.82
O00370 Z99289.3-201ENST00000605586 594 ntBASIC3.67□□□□□ -1.82
O00370 AC090116.1-201ENST00000615679 446 ntBASIC3.67□□□□□ -1.82
O00370 AC120349.2-201ENST00000625002 298 ntBASIC3.67□□□□□ -1.82
O00370 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms