Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC28A1O00337 AC119501.1-201ENST00000603646 475 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SLC28A1O00337 AC018816.2-201ENST00000621460 353 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 AC068724.3-201ENST00000625906 87 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC28A1O00337 AC010733.2-201ENST00000589496 5702 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 MTND5P24-201ENST00000438892 1767 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 AF117829.1-206ENST00000621883 3802 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC28A1O00337 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC28A1O00337 AC007256.1-201ENST00000392253 2765 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC28A1O00337 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC28A1O00337 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC28A1O00337 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC28A1O00337 MIR1284-201ENST00000408337 120 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 Z99755.1-201ENST00000414048 380 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC28A1O00337 YPEL5P1-201ENST00000419731 367 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC28A1O00337 MTCO1P39-201ENST00000426148 480 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC28A1O00337 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC28A1O00337 AC091390.1-201ENST00000433904 331 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC28A1O00337 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC28A1O00337 NOTCH2P1-201ENST00000443481 624 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.29□□□□□ -1.88
SLC28A1O00337 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC28A1O00337 AL353691.1-201ENST00000451332 387 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC28A1O00337 GTF2IP9-201ENST00000502460 301 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC28A1O00337 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC28A1O00337 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC28A1O00337 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC28A1O00337 AC092593.2-201ENST00000513866 913 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC28A1O00337 OR5AK1P-201ENST00000524837 922 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.29□□□□□ -1.88
SLC28A1O00337 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC28A1O00337 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SLC28A1O00337 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC28A1O00337 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC28A1O00337 AC009712.1-201ENST00000564938 316 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC28A1O00337 AC022662.1-201ENST00000580252 331 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 VN1R85P-201ENST00000601587 426 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 DUXAP11-201ENST00000603858 526 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 AC004853.1-201ENST00000604902 698 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC28A1O00337 U6.98-201ENST00000637157 84 ntBASIC3.29□□□□□ -1.88
SLC28A1O00337 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC28A1O00337 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
SLC28A1O00337 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC28A1O00337 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC28A1O00337 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC28A1O00337 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC28A1O00337 RNU6-28P-201ENST00000362378 107 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC28A1O00337 RNU6-1242P-201ENST00000391052 103 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 RPL23AP29-201ENST00000397284 453 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 RPL21P17-201ENST00000397467 475 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 RN7SKP111-201ENST00000410349 271 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 TPMTP2-201ENST00000414372 726 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC28A1O00337 CYCSP4-201ENST00000429682 331 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 AC004866.2-201ENST00000438285 481 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 AL645638.1-201ENST00000440519 361 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 AL121871.1-201ENST00000443413 436 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC28A1O00337 AC073387.1-201ENST00000453261 709 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC28A1O00337 RNU7-136P-201ENST00000458819 69 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 AC103987.1-201ENST00000473394 348 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 RN7SL442P-201ENST00000473804 320 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 FAM172BP-201ENST00000487497 1089 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.28□□□□□ -1.88
SLC28A1O00337 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC28A1O00337 PRELID3BP5-201ENST00000508612 460 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.28□□□□□ -1.88
SLC28A1O00337 RN7SKP157-201ENST00000516174 282 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC28A1O00337 AC084824.1-201ENST00000550917 1005 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC28A1O00337 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.28□□□□□ -1.88
SLC28A1O00337 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC28A1O00337 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC28A1O00337 AC067852.3-201ENST00000589177 561 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.28□□□□□ -1.88
SLC28A1O00337 AL022099.1-201ENST00000604551 712 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 AC106028.5-201ENST00000610332 395 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 AL110115.1-201ENST00000614396 364 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 AL596245.1-201ENST00000618994 362 ntBASIC3.28□□□□□ -1.88
SLC28A1O00337 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.88
SLC28A1O00337 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC28A1O00337 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SLC28A1O00337 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC28A1O00337 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms