Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 Z97055.1-201ENST00000419730 712 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 AC234781.2-201ENST00000426370 994 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SRRM4A7MD48 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 Z74696.2-201ENST00000436514 498 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 MTND5P2-201ENST00000442927 1142 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 AC009220.1-201ENST00000451614 275 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 RPL21P11-201ENST00000461458 483 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 RPS23P7-201ENST00000466210 444 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 AC072039.1-201ENST00000477611 581 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 TRBV12-2-201ENST00000489763 344 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 AC010486.2-201ENST00000505572 483 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 RN7SKP122-201ENST00000515923 296 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 RNU6-528P-201ENST00000516926 100 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SRRM4A7MD48 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 DUXAP6-201ENST00000553858 601 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 AL022099.1-201ENST00000604551 712 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 AC009268.2-201ENST00000621925 457 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 AL353748.2-201ENST00000622148 471 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SRRM4A7MD48 PCMTD1P7-201ENST00000634506 357 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 EXOC5P1-201ENST00000510543 1969 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SRRM4A7MD48 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SRRM4A7MD48 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SRRM4A7MD48 AC005832.2-201ENST00000538921 1430 ntBASIC3.1□□□□□ -1.91
SRRM4A7MD48 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SRRM4A7MD48 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC006504.1-201ENST00000562493 3666 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 MAPK10-373ENST00000641983 6772 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 MIR423-201ENST00000362201 94 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 RNA5SP295-201ENST00000362655 121 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 Y_RNA.169-201ENST00000363745 96 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SRRM4A7MD48 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 SNORD116-8-201ENST00000384365 95 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 MIR199A2-201ENST00000385289 110 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 ATP5F1P3-201ENST00000397213 657 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AL365396.1-201ENST00000430854 671 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AL590103.1-201ENST00000434488 307 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 AL831737.1-201ENST00000441288 271 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC010655.1-201ENST00000449336 292 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 HMGN2P16-201ENST00000456802 261 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 SNRPGP3-201ENST00000469405 227 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC084198.1-201ENST00000477747 402 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 AL139099.1-201ENST00000497398 403 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC010486.3-201ENST00000511602 785 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 MTCO3P28-201ENST00000513351 515 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC034159.1-201ENST00000513885 583 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 RNU6-1129P-201ENST00000515964 104 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SRRM4A7MD48 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC135279.1-201ENST00000543493 504 ntBASIC3.09□□□□□ -1.91
SRRM4A7MD48 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.09□□□□□ -1.91
SRRM4A7MD48 AC084824.1-201ENST00000550917 1005 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms