Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 MORF4L1P7-201ENST00000426038 703 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 HMGN2P21-201ENST00000447764 270 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 AC079804.2-201ENST00000490376 200 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 OR4G11P-201ENST00000492842 939 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 OR4R1P-201ENST00000529879 463 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 AP002770.2-201ENST00000543613 532 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 U2.15-201ENST00000611544 191 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 U2.16-201ENST00000613119 191 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 U2.12-201ENST00000613778 191 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 U2.20-201ENST00000613956 192 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 U2.9-201ENST00000615427 191 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 U2.11-201ENST00000616345 191 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 U2.2-201ENST00000616535 191 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 U2.3-201ENST00000617785 191 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 U2.19-201ENST00000618602 191 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 RNU2-1-201ENST00000618664 191 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 U2.6-201ENST00000619225 191 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 U2.5-201ENST00000619465 191 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 U2.10-201ENST00000620268 191 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 MIR6852-201ENST00000621699 66 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 AC092184.1-201ENST00000625042 715 ntBASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC1.76□□□□□ -2.13
CPSF4LA6NMK7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 SUMO2P12-201ENST00000405924 140 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 RPL23AP47-201ENST00000408017 460 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 SNORA3.2-201ENST00000408221 125 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 MIR1289-1-201ENST00000408836 144 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 RNA5SP80-201ENST00000410475 111 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 RNA5SP508-201ENST00000411327 119 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AC105402.1-201ENST00000413336 545 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 DPH3P2-201ENST00000422618 250 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AL139415.2-201ENST00000431968 163 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AC010881.1-201ENST00000433830 235 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AL590103.1-201ENST00000434488 307 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 FAM103A2P-201ENST00000444122 354 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 RN7SL274P-201ENST00000492268 272 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AC106872.3-201ENST00000495104 446 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AC008549.1-201ENST00000512900 643 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 RN7SKP40-201ENST00000517211 242 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 HMGN1P28-201ENST00000521340 364 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AC239860.2-201ENST00000525886 270 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AL049838.1-201ENST00000563647 981 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 MIR6895-201ENST00000613497 78 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 YWHAEP7-203ENST00000622054 312 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AC064859.1-201ENST00000624741 174 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 AC002546.1-201ENST00000588041 2504 ntBASIC1.75□□□□□ -2.13
CPSF4LA6NMK7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 NR1H5P-201ENST00000452683 1377 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 RNA5SP489-201ENST00000410986 109 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 RPL31P45-201ENST00000419532 356 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AC004866.2-201ENST00000438285 481 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AC005912.1-201ENST00000495392 255 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AP000790.1-201ENST00000528891 737 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AC007115.1-201ENST00000546853 234 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AC068714.1-201ENST00000559623 800 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AC090425.2-201ENST00000608818 501 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms