Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MTCO1P14-201ENST00000441695 1559 ntBASIC3.25□□□□□ -1.89
TRBV5-4A0A0C4DH59 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRBV5-4A0A0C4DH59 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 RNU6-931P-201ENST00000363850 107 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 RNU6-339P-201ENST00000384310 107 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 RNA5SP171-201ENST00000391071 115 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 RPL23AP29-201ENST00000397284 453 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 RSL24D1P4-201ENST00000400938 484 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AL049610.1-201ENST00000423374 372 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 ISCA1P2-201ENST00000438679 421 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC127537.2-201ENST00000439258 465 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 Z99127.3-201ENST00000448158 395 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC104978.1-201ENST00000449387 391 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 USP9YP34-201ENST00000453983 808 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 MTCO3P11-201ENST00000455103 774 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 HMGN1P18-201ENST00000457642 277 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 RPL21P10-201ENST00000463521 490 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 RPS4XP10-201ENST00000465034 731 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 RNU6-1231P-201ENST00000517185 103 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 SCARNA20.6-201ENST00000517251 106 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 HSPA8P13-201ENST00000523715 472 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 MTATP6P15-201ENST00000527233 835 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC011611.1-201ENST00000552179 197 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC008507.1-201ENST00000587506 734 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC017037.3-201ENST00000625016 472 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 MTND5P24-201ENST00000438892 1767 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 NUP58P1-201ENST00000502546 1738 ntBASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRBV5-4A0A0C4DH59 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AL355596.1-201ENST00000565399 3996 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 MIR7-3-201ENST00000384898 110 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AF228730.1-201ENST00000397972 663 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 HMGB1P17-201ENST00000403495 628 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC107081.1-201ENST00000414975 361 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 MTCYBP38-201ENST00000417160 1123 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC005300.1-201ENST00000428401 373 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 YME1L1P1-201ENST00000429435 297 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 MTATP6P17-201ENST00000431030 672 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 CST9LP2-201ENST00000437612 320 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AL354941.1-201ENST00000438600 464 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AL109741.2-201ENST00000455561 343 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC097493.1-201ENST00000463958 372 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC093281.2-201ENST00000510153 597 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 DEFB131D-201ENST00000526803 184 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AP003385.6-201ENST00000531603 374 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 UBE2NP1-201ENST00000545592 458 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 AC004024.1-201ENST00000549244 247 ntBASIC3.23□□□□□ -1.89
TRBV5-4A0A0C4DH59 HIGD1AP1-201ENST00000550979 275 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms