Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.22□□□□□ -2.21
LINC01558Q9Y6Z2 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
LINC01558Q9Y6Z2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
LINC01558Q9Y6Z2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
LINC01558Q9Y6Z2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
LINC01558Q9Y6Z2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
LINC01558Q9Y6Z2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
LINC01558Q9Y6Z2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.22□□□□□ -2.21
LINC01558Q9Y6Z2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 ZNF833P-201ENST00000424938 1494 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 RNU6-171P-201ENST00000384354 107 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 MIR767-201ENST00000390228 109 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 RNA5SP80-201ENST00000410475 111 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 RSL24D1P6-201ENST00000426934 401 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 RPL7L1P10-201ENST00000427790 463 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 AC091286.1-201ENST00000431233 461 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 RPS20P5-201ENST00000434808 360 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 RPL35AP22-201ENST00000436855 335 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 ARPC3P1-201ENST00000437218 533 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 XKRY2-201ENST00000442362 1093 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 AC112653.1-201ENST00000443851 386 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 WASF1P1-201ENST00000447560 1131 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 BX248409.1-201ENST00000455497 255 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 CABYRP1-201ENST00000465493 1045 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 XKRY-201ENST00000510392 1100 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 HMGN2P6-201ENST00000551091 273 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 MTCYBP28-201ENST00000566728 1132 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 MIR3122-201ENST00000577243 73 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 AC090897.2-201ENST00000581715 130 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 AC067747.1-201ENST00000608026 250 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 TAB3P1-202ENST00000452645 1634 ntBASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LINC01558Q9Y6Z2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 MIR323A-201ENST00000362199 86 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 RNU6-234P-201ENST00000365229 104 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 RNU6-452P-201ENST00000384406 107 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 SNORD3H-201ENST00000384486 214 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 SNORA17A-201ENST00000391185 133 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 RPL17P12-201ENST00000413391 526 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 BX842559.1-201ENST00000419615 532 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC069213.2-201ENST00000420238 366 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AL035423.1-201ENST00000420331 213 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 RPL31P63-201ENST00000422565 375 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AL358075.3-201ENST00000426289 226 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC023141.6-201ENST00000429418 337 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 HMGN1P2-201ENST00000445197 310 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 PNPLA4P1-201ENST00000458328 305 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC087588.1-201ENST00000462203 316 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC109925.1-201ENST00000478069 331 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 MLLT10P2-201ENST00000506434 249 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC096571.1-202ENST00000506634 735 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 CBX3P3-201ENST00000508108 532 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC006499.2-201ENST00000513470 337 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 MTATP6P1-201ENST00000514057 681 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC008494.2-201ENST00000514544 370 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 COX6B1P6-201ENST00000522347 255 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AP000676.2-201ENST00000529711 301 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AL049874.4-201ENST00000557593 255 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 MIR4504-201ENST00000577413 92 ntBASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.2□□□□□ -2.22
LINC01558Q9Y6Z2 AC138207.8-204ENST00000579588 527 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms