Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC104850.1-201ENST00000435940 476 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 UBE2V1P8-201ENST00000437166 265 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 MTATP6P30-201ENST00000443540 664 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC132479.1-201ENST00000449160 144 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC079448.1-201ENST00000449377 373 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 RN7SL517P-201ENST00000462240 305 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC023598.1-201ENST00000472521 361 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 RPL35P6-201ENST00000490024 372 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AP001893.2-201ENST00000526949 202 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AP003072.2-201ENST00000527756 676 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 MED28P5-201ENST00000528254 438 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AP003034.1-201ENST00000534621 422 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC090948.1-201ENST00000607464 549 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC068944.2-201ENST00000610373 403 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AL590282.1-201ENST00000610379 1136 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC090517.2-201ENST00000614966 680 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AL732618.1-201ENST00000623251 301 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC012020.1-201ENST00000624541 1728 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 AC139713.2-215ENST00000641428 5037 ntBASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA3Q9Y5H0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 ZFRP1-201ENST00000457579 2970 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 Y_RNA.9-201ENST00000362354 101 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 RNU6-1155P-201ENST00000363554 107 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 RNY4P16-201ENST00000364768 94 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 MIR708-201ENST00000390708 88 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 AC002486.1-201ENST00000435098 391 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 FTH1P1-201ENST00000437933 532 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 TPT1P14-201ENST00000448018 505 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 FGF7P3-201ENST00000454645 303 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 AC011352.1-201ENST00000512300 793 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 RNU6-798P-201ENST00000516912 103 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 MIR4277-201ENST00000578298 84 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 MIR5699-201ENST00000578903 90 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 AL359880.1-201ENST00000621879 266 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 AL049536.1-201ENST00000625043 744 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 OR56B2P-202ENST00000641377 2453 ntBASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA3Q9Y5H0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 RNU6-1097P-201ENST00000363586 107 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 Y_RNA.481-201ENST00000384373 102 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 RNU4-65P-201ENST00000410473 140 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 AC244098.2-201ENST00000422068 99 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 MTCO2P3-201ENST00000442543 421 ntBASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA3Q9Y5H0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms