Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 MIR6073-201ENST00000352083 89 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 AL139156.1-201ENST00000412785 841 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 SPA17P1-201ENST00000416656 452 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 AL138785.1-201ENST00000425821 331 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 Z82205.1-201ENST00000428456 297 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 GNAI2P1-201ENST00000541815 315 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 AC073348.1-201ENST00000623002 331 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 SNORA50A-202ENST00000629536 136 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 AC072039.1-201ENST00000477611 581 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 FAM92A1P2-202ENST00000504766 877 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 AC010378.1-201ENST00000619270 362 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 MIR6132-201ENST00000622083 109 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 MIR219B-201ENST00000637023 88 ntBASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.28□□□□□ -1.88
SHANK2Q9UPX8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
SHANK2Q9UPX8 AC025125.1-201ENST00000624743 1922 ntBASIC3.27□□□□□ -1.89
SHANK2Q9UPX8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHANK2Q9UPX8 SNORA48.3-201ENST00000391081 134 ntBASIC3.27□□□□□ -1.89
SHANK2Q9UPX8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.27□□□□□ -1.89
SHANK2Q9UPX8 NDUFA5P4-201ENST00000436704 385 ntBASIC3.27□□□□□ -1.89
SHANK2Q9UPX8 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.27□□□□□ -1.89
SHANK2Q9UPX8 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.27□□□□□ -1.89
SHANK2Q9UPX8 AC060766.3-201ENST00000591442 263 ntBASIC3.27□□□□□ -1.89
SHANK2Q9UPX8 AL451074.6-201ENST00000608512 729 ntBASIC3.27□□□□□ -1.89
SHANK2Q9UPX8 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.27□□□□□ -1.89
SHANK2Q9UPX8 AP002967.1-201ENST00000624203 539 ntBASIC3.27□□□□□ -1.89
SHANK2Q9UPX8 MTND5P7-201ENST00000413558 1798 ntBASIC3.27□□□□□ -1.89
SHANK2Q9UPX8 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHANK2Q9UPX8 U8.9-201ENST00000365667 134 ntBASIC3.26□□□□□ -1.89
SHANK2Q9UPX8 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHANK2Q9UPX8 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.26□□□□□ -1.89
SHANK2Q9UPX8 SAR1AP4-201ENST00000429225 591 ntBASIC3.26□□□□□ -1.89
SHANK2Q9UPX8 MTCYBP31-201ENST00000438855 1122 ntBASIC3.26□□□□□ -1.89
SHANK2Q9UPX8 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.26□□□□□ -1.89
SHANK2Q9UPX8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.26□□□□□ -1.89
SHANK2Q9UPX8 NF1P5-201ENST00000588287 448 ntBASIC3.26□□□□□ -1.89
SHANK2Q9UPX8 AC128687.1-201ENST00000605304 619 ntBASIC3.26□□□□□ -1.89
SHANK2Q9UPX8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SHANK2Q9UPX8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 RNU1-138P-201ENST00000384093 164 ntBASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 SNORA67.3-201ENST00000384366 140 ntBASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 TRBV26-201ENST00000456572 344 ntBASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 Y_RNA.670-201ENST00000516255 105 ntBASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 AC008083.2-201ENST00000546707 476 ntBASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 TPMTP1-201ENST00000592307 737 ntBASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 AL356266.1-201ENST00000623311 483 ntBASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 AC092447.7-201ENST00000422212 1621 ntBASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 AC004520.1-201ENST00000608362 1413 ntBASIC3.25□□□□□ -1.89
SHANK2Q9UPX8 OR5H15-201ENST00000383696 930 ntBASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 YWHAZP7-201ENST00000436906 631 ntBASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 TAF9P1-201ENST00000445421 515 ntBASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 TAF9P2-201ENST00000454958 515 ntBASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 SNRPGP9-201ENST00000456025 225 ntBASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 IGHV3-76-201ENST00000522465 295 ntBASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 OR4R2P-201ENST00000530815 597 ntBASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 AC013562.2-201ENST00000611632 603 ntBASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 AL161431.1-201ENST00000618966 4205 ntBASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHANK2Q9UPX8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 MAGOH2P-202ENST00000584384 429 ntBASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 AL627309.6-201ENST00000606857 840 ntBASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 MFSD8-245ENST00000641743 948 ntBASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 AP001486.2-201ENST00000561652 5113 ntBASIC3.23□□□□□ -1.89
SHANK2Q9UPX8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms