Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RNU6-903P-201ENST00000391270 109 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 EIF4E2P1-201ENST00000393781 255 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 FAR2P2-201ENST00000413041 594 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 FAR2P4-202ENST00000425399 584 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC119618.1-201ENST00000434191 222 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AL138787.1-202ENST00000437804 898 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC020550.1-201ENST00000447385 163 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 HMGN1P9-201ENST00000515212 298 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 RNU7-200P-201ENST00000516105 62 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 RNU4-71P-201ENST00000516258 113 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 RNU6-1308P-201ENST00000516817 103 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 RNU6-844P-201ENST00000517175 102 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC087441.2-201ENST00000529141 262 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 CBX3P4-201ENST00000538909 354 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AP000769.2-201ENST00000602344 396 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC010378.1-201ENST00000619270 362 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 OR9K1P-202ENST00000641111 3217 ntBASIC6.88□□□□□ -1.31
PDZRN3Q9UPQ7 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 RNU6-1298P-201ENST00000362456 101 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 RNU6-552P-201ENST00000362869 119 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 RNU6-153P-201ENST00000364422 104 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 RNU6-44P-201ENST00000384045 107 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 HMGB3P7-201ENST00000400214 611 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 AL391417.1-201ENST00000404100 426 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 AC073264.1-201ENST00000411508 416 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 TRBVB-201ENST00000477100 408 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 AC022493.2-201ENST00000506122 481 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 AC009901.1-201ENST00000506703 541 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 SNORA25.11-201ENST00000515935 105 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 Y_RNA.708-201ENST00000516950 96 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 MIR4480-201ENST00000582492 71 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 AL008729.2-201ENST00000606393 473 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 AC109583.2-201ENST00000617367 129 ntBASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDZRN3Q9UPQ7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 DDX18P3-201ENST00000404856 2007 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 SNRPEP3-201ENST00000338402 276 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 RNU6-682P-201ENST00000363843 106 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 RNU5A-8P-201ENST00000364102 114 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 RNU6-215P-201ENST00000365169 102 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 RN7SKP186-201ENST00000365371 303 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AL672167.2-201ENST00000377164 879 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 Y_RNA.473-201ENST00000384333 102 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 RNA5SP487-201ENST00000410186 122 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AC078974.1-201ENST00000411597 223 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AC090142.1-201ENST00000465776 462 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 RPL7L1P8-201ENST00000469911 741 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 RPS27P26-201ENST00000494583 239 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AC074198.2-201ENST00000508153 258 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 Y_RNA.670-201ENST00000516255 105 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 SCARNA16.4-201ENST00000516956 187 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 SCARNA20.4-201ENST00000516969 131 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AC027309.2-201ENST00000520566 192 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AC107934.1-201ENST00000522215 217 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms