Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AP003033.1-201ENST00000527244 415 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 OR6C7P-201ENST00000547875 934 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC007424.1-203ENST00000554613 687 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AGGF1P8-201ENST00000562979 1000 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC006362.1-201ENST00000567392 174 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 KLKP1-201ENST00000595979 403 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 SNORA51-201ENST00000606420 132 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC243773.3-201ENST00000613270 256 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AL356596.1-201ENST00000624230 379 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 AC231657.1-201ENST00000624313 397 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.88□□□□□ -1.79
SIX4Q9UIU6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX4Q9UIU6 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 CR383658.2-201ENST00000547576 1525 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 SNORA71.3-201ENST00000362582 128 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 RNA5SP322-201ENST00000363617 119 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 RNA5SP42-201ENST00000364278 115 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 Y_RNA.559-201ENST00000384686 107 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AL355379.1-201ENST00000405542 640 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC017079.2-201ENST00000416102 485 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 CYCSP46-201ENST00000423569 204 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 CYCSP4-201ENST00000429682 331 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 UBE2FP3-201ENST00000436366 524 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AP000926.1-201ENST00000479573 241 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC006499.2-201ENST00000513470 337 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 RN7SKP83-201ENST00000516512 178 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC087276.1-201ENST00000529659 480 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 RFPL1S-203ENST00000539579 330 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 CCNG2P1-201ENST00000549521 1000 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC022146.1-201ENST00000595307 847 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC006077.1-201ENST00000604746 343 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC239868.4-201ENST00000608318 671 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC013562.2-201ENST00000611632 603 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AL359535.1-201ENST00000612100 1087 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC009878.1-201ENST00000621819 340 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC092656.1-203ENST00000624134 423 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC006927.3-201ENST00000638789 384 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC073073.2-201ENST00000609827 2578 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 MTND4P5-201ENST00000435821 1374 ntBASIC3.87□□□□□ -1.79
SIX4Q9UIU6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.87□□□□□ -1.79
SIX4Q9UIU6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC106871.1-201ENST00000568324 3102 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 PABPC1P9-201ENST00000426076 1612 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 RNU6-723P-201ENST00000383973 107 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 MIR649-201ENST00000384843 97 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 MIR3074-201ENST00000384885 81 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC073264.1-201ENST00000411508 416 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AL031779.1-201ENST00000415663 330 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 MTCO2P34-201ENST00000421994 607 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AL389915.1-201ENST00000422463 466 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC023347.2-201ENST00000433994 462 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 HSPD1P21-201ENST00000436541 245 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 ATP5C1P1-201ENST00000441945 895 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 COX6CP2-201ENST00000444980 225 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 RPL39P6-201ENST00000448289 150 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 SNORD105B-201ENST00000458770 79 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC010301.1-201ENST00000473936 355 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms