Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
DKK3Q9UBP4 FARSBP1-201ENST00000435808 1778 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 RPL23AP57-201ENST00000332361 466 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 MIR331-201ENST00000362302 94 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 RNA5SP52-201ENST00000362448 134 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 RNA5SP515-201ENST00000364570 118 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 RNA5SP167-201ENST00000365461 116 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 RNU6-952P-201ENST00000391164 108 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AL138878.1-201ENST00000405131 347 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 RNA5SP39-201ENST00000411245 120 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AC009237.5-201ENST00000414271 501 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 RPS3AP9-201ENST00000417027 792 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 C1DP2-201ENST00000418167 426 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 RPL31P45-201ENST00000419532 356 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 MTND6P13-201ENST00000443510 523 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AL359073.1-201ENST00000448036 403 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AC146507.1-201ENST00000468335 354 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 RPL31P50-201ENST00000471002 296 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AC108078.1-201ENST00000508073 725 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AC024589.1-201ENST00000512207 263 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 RNU6-1003P-201ENST00000517099 105 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AP003467.2-201ENST00000520175 319 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 OR5AP1P-201ENST00000529730 940 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 RPL21P5-201ENST00000554662 472 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 MIR3682-201ENST00000581338 84 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AC022916.3-201ENST00000592961 742 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 LLPHP1-201ENST00000603571 367 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AP002907.1-201ENST00000606361 1430 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AC080013.4-201ENST00000607624 649 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AC023043.4-201ENST00000612081 449 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AL158209.2-201ENST00000619266 216 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AC140113.4-201ENST00000622087 222 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AL157786.1-207ENST00000627771 695 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 AC140479.6-201ENST00000633535 357 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 EOGT-210ENST00000615922 1931 ntBASIC4.42□□□□□ -1.7
DKK3Q9UBP4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
DKK3Q9UBP4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 SNORA51.6-201ENST00000384151 125 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 MIR134-201ENST00000385258 73 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 ARF4P3-201ENST00000397387 509 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 AC011933.1-201ENST00000413334 321 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 AL445669.1-201ENST00000426743 755 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 NPM1P34-201ENST00000428821 893 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 AC009961.2-201ENST00000435771 251 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 Z95327.1-201ENST00000446082 482 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 GAPDHP17-201ENST00000449858 1001 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 AL359385.1-201ENST00000456509 365 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 HMGB3P30-201ENST00000457863 606 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 snoU13.22-201ENST00000459428 104 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 AC116533.1-201ENST00000459748 321 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 RPL9P32-201ENST00000464118 620 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 RPL7P22-201ENST00000466005 733 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 AC090453.1-201ENST00000495560 436 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 AC108475.1-201ENST00000507880 950 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.41□□□□□ -1.7
DKK3Q9UBP4 PTGES3P3-201ENST00000511479 482 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 RNU6-528P-201ENST00000516926 100 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 MIR2116-201ENST00000517221 80 ntBASIC4.41□□□□□ -1.7
DKK3Q9UBP4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms