Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 RPL21P65-201ENST00000406094 466 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 RPS7P13-201ENST00000413955 498 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 OFD1P18Y-201ENST00000420889 959 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 MTND1P28-201ENST00000435623 950 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC127537.2-201ENST00000439258 465 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 RPL36AP13-201ENST00000457490 317 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 RPL38P1-201ENST00000460914 211 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC146507.1-201ENST00000468335 354 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC087312.1-201ENST00000471411 480 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC109927.2-201ENST00000506416 303 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 MTCO3P44-201ENST00000510977 541 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC006499.2-201ENST00000513470 337 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 EIF1P4-201ENST00000572664 335 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC136618.2-201ENST00000575091 400 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 MTND1P15-201ENST00000579262 949 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 MIR548AB-201ENST00000584917 84 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC104662.1-201ENST00000604448 511 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC107214.2-201ENST00000608204 634 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC012360.2-201ENST00000609349 391 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC128687.2-201ENST00000609657 566 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AL357080.1-201ENST00000617394 239 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC018755.4-201ENST00000619715 454 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 OR11H5P-202ENST00000641612 1325 ntBASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.1□□□□□ -1.75
NCKIPSDQ9NZQ3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC008725.1-201ENST00000605123 2263 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 SNORA60-201ENST00000362396 134 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 RNY3P10-201ENST00000384764 102 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 RPL31P1-201ENST00000398116 372 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 RNU6ATAC-201ENST00000408749 126 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 MTCYBP5-201ENST00000423752 1135 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 OR8F1P-201ENST00000425243 930 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AL365184.2-201ENST00000431139 435 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC007389.2-201ENST00000434630 306 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AL031667.1-201ENST00000440222 725 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AL592447.1-201ENST00000447592 540 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 MTCYBP1-201ENST00000454315 1119 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 MEMO1P3-201ENST00000459811 302 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 VN1R105P-201ENST00000486595 910 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC079089.3-201ENST00000603094 673 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC068276.1-201ENST00000605793 379 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC080013.4-201ENST00000607624 649 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 MIR6875-201ENST00000617506 72 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AL356596.1-201ENST00000624230 379 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC025048.6-202ENST00000627667 438 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 MTND4P16-201ENST00000466108 1367 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 AC005832.2-201ENST00000538921 1430 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 OR4G11P-202ENST00000642116 1414 ntBASIC4.09□□□□□ -1.75
NCKIPSDQ9NZQ3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms