Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AL591516.1-201ENST00000611326 274 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AC008083.4-201ENST00000615076 444 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AC078880.5-201ENST00000617845 421 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 VN1R7P-201ENST00000619242 903 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 AP003122.6-201ENST00000623831 495 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 MIR3651-201ENST00000630427 90 ntBASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
KLHL28Q9NXS3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 SNORD56.3-201ENST00000363507 71 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 CYCSP45-201ENST00000402289 315 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 FAT1P1-201ENST00000406588 507 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AC092447.6-201ENST00000414578 210 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AC005300.1-201ENST00000428401 373 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AC005326.1-201ENST00000429197 123 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AL591503.2-201ENST00000442314 1005 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AC115115.1-201ENST00000449927 248 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 RPL21P18-201ENST00000469899 480 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 MTND2P31-201ENST00000512602 616 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 RNU6-27P-201ENST00000516146 107 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 RN7SKP57-201ENST00000517248 293 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 IGKV2-26-201ENST00000518305 343 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 ZNF415P1-201ENST00000582279 1166 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AL157817.1-201ENST00000614264 790 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 MIR6076-201ENST00000617521 113 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AC022509.4-201ENST00000621404 572 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AC026634.1-201ENST00000634369 198 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 AL049781.1-201ENST00000623195 3585 ntBASIC3.05□□□□□ -1.92
KLHL28Q9NXS3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 GDI2P1-201ENST00000429312 1336 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 SNORA38.1-201ENST00000364172 131 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 MIR217-201ENST00000384817 110 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AL133264.1-201ENST00000407157 562 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 USP9YP19-201ENST00000412165 485 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC027644.1-201ENST00000419595 298 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC006960.1-201ENST00000419980 153 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC091390.3-201ENST00000426478 338 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 CYCSP32-201ENST00000440548 321 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AP003168.1-201ENST00000530091 307 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AP001317.1-201ENST00000531194 960 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC006518.1-201ENST00000541449 943 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC090666.1-201ENST00000578241 445 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC009570.1-201ENST00000609599 745 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC127502.3-201ENST00000636170 1206 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 AC139713.2-210ENST00000641741 992 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 CUL1P1-201ENST00000509510 2425 ntBASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
KLHL28Q9NXS3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
KLHL28Q9NXS3 U3.19-201ENST00000390893 196 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms