Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 RNA5SP239-201ENST00000410218 129 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 ELOCP19-201ENST00000411919 318 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC004987.3-201ENST00000413879 771 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD248Q9HCU0 SPA17P1-201ENST00000416656 452 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 BOLA3P4-201ENST00000418151 400 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 NANOGP6-201ENST00000429190 847 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 GTF2IP20-201ENST00000431663 360 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 AK3P4-201ENST00000504283 583 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 IGKV2-36-201ENST00000519999 223 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC136624.4-201ENST00000573044 370 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 MIR5699-201ENST00000578903 90 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 MIR4307-201ENST00000582802 84 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC007621.1-201ENST00000604544 437 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC011816.2-201ENST00000607089 556 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 AP004247.3-201ENST00000608682 624 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 RMST_3.1-201ENST00000611651 109 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC009268.2-201ENST00000621925 457 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 AC231657.1-201ENST00000624313 397 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD248Q9HCU0 DHX9P1-201ENST00000436565 3076 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CD248Q9HCU0 DBF4P1-201ENST00000412976 1892 ntBASIC4.88□□□□□ -1.63
CD248Q9HCU0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 RNA5SP52-201ENST00000362448 134 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 RNU1-108P-201ENST00000362556 161 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 MIR129-1-201ENST00000384972 72 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 MIR1303-201ENST00000408625 86 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 RAD23BP1-201ENST00000421404 1227 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 EIF1P3-201ENST00000423841 334 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC016831.4-201ENST00000438302 307 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 RPL7P54-201ENST00000438336 674 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 RPL22P17-201ENST00000438729 315 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 RNU6-420P-201ENST00000458780 107 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AL161747.1-201ENST00000480068 358 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC093267.1-201ENST00000489176 961 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC026979.1-201ENST00000492525 396 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC093278.1-201ENST00000494700 600 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC139783.2-201ENST00000504847 1145 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 POU5F1P7-201ENST00000508759 541 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 RNU6-583P-201ENST00000516012 92 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 MYL12AP1-201ENST00000518490 515 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 HMGB1P23-201ENST00000518743 568 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 AL049839.1-201ENST00000556151 657 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 MIR4284-201ENST00000578924 81 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC006504.6-201ENST00000590142 199 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC022916.3-201ENST00000592961 742 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AL139395.1-201ENST00000603662 160 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 AC099669.2-201ENST00000616549 437 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AL603758.1-201ENST00000618654 241 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD248Q9HCU0 MAPK10-303ENST00000641324 3959 ntBASIC4.87□□□□□ -1.63
CD248Q9HCU0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.87□□□□□ -1.63
CD248Q9HCU0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD248Q9HCU0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD248Q9HCU0 AL359922.3-201ENST00000624779 1670 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms