Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 RNU4-24P-201ENST00000364565 139 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AL138878.1-201ENST00000405131 347 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 HMGB3P20-201ENST00000417997 600 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 NDUFB1P1-201ENST00000435191 180 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 RPS29P31-201ENST00000446147 164 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 EPS15P1-201ENST00000448836 336 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC099563.1-201ENST00000456086 418 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 TRBV26-201ENST00000456572 344 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AP001086.1-201ENST00000494882 321 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC010424.1-201ENST00000506336 297 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 MTND4P2-201ENST00000507767 1203 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 NPM1P41-201ENST00000512920 831 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC006499.2-201ENST00000513470 337 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 MTND5P4-201ENST00000514978 288 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC104057.1-201ENST00000515547 497 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 SCARNA14-201ENST00000516903 136 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC092851.1-201ENST00000535964 478 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 HSPE1P5-201ENST00000561489 272 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC006362.1-201ENST00000567392 174 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 MIR5685-201ENST00000579080 79 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC022146.1-201ENST00000595307 847 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC092354.1-201ENST00000606057 376 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC239868.4-201ENST00000608318 671 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC103591.3-201ENST00000608684 209 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC005344.1-201ENST00000613391 459 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 MIR7844-201ENST00000616161 122 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC018816.2-201ENST00000621460 353 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC090582.1-201ENST00000636321 199 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 AC006927.3-201ENST00000638789 384 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 RPS4XP5-202ENST00000449995 1334 ntBASIC3.84□□□□□ -1.79
PCDH9Q9HC56 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDH9Q9HC56 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PCDH9Q9HC56 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PCDH9Q9HC56 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PCDH9Q9HC56 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.84□□□□□ -1.8
PCDH9Q9HC56 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.84□□□□□ -1.8
PCDH9Q9HC56 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 RNU4-21P-201ENST00000362802 126 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 DHFRP6-201ENST00000401776 268 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 BTBD10P2-201ENST00000404779 676 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 RN7SKP142-201ENST00000411236 328 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 HMGB1P11-201ENST00000413899 637 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 RPL30P2-201ENST00000414021 291 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AL035410.1-201ENST00000427409 427 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 OR4F13P-201ENST00000428478 931 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 UBE2FP3-201ENST00000436366 524 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AL512286.1-201ENST00000439244 400 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 RPL21P133-201ENST00000443666 476 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 PLGLA-201ENST00000465668 449 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 RPS20P21-201ENST00000466859 343 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AC017015.1-201ENST00000477387 286 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AC109486.1-201ENST00000486833 374 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AC114981.1-201ENST00000503897 678 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AC006499.5-201ENST00000505037 514 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AC021146.1-201ENST00000511202 716 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AC104986.1-201ENST00000517978 436 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 RSL24D1P11-201ENST00000591045 491 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDH9Q9HC56 YWHAQP7-201ENST00000603536 658 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 LLPHP1-201ENST00000603571 367 ntBASIC3.83□□□□□ -1.8
PCDH9Q9HC56 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms