Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 FTH1P21-201ENST00000512179 511 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC010265.1-201ENST00000513509 211 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 SNORA31.9-201ENST00000516429 84 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 HIGD1AP5-201ENST00000529959 259 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC126177.3-201ENST00000551839 688 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 MIR3939-201ENST00000582614 106 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC245036.5-201ENST00000596330 847 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 XIAPP1-201ENST00000603162 600 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AL355812.1-201ENST00000603215 216 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 MLECP1-201ENST00000615893 709 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC006338.2-201ENST00000616864 791 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AL356321.1-201ENST00000621360 228 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 U4.6-201ENST00000621618 127 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC011330.2-201ENST00000621680 635 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AL356863.1-201ENST00000623378 1080 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 LRRC77P-213ENST00000637727 880 ntBASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
VIPAS39Q9H9C1 MTND5P7-201ENST00000413558 1798 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 RPL23AP29-201ENST00000397284 453 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AL138880.1-201ENST00000405824 642 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AL807761.1-201ENST00000417622 171 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 DBIP2-201ENST00000419076 262 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AC006548.1-201ENST00000427470 102 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AL591719.1-201ENST00000444669 744 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 Z73417.1-201ENST00000447373 778 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 USP9YP34-201ENST00000453983 808 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 RPL7P18-201ENST00000478965 734 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 OR5AK1P-201ENST00000524837 922 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AP004371.1-201ENST00000525240 214 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 MTCYBP41-201ENST00000528913 1123 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AC015917.1-201ENST00000579654 510 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 KPNA2P3-201ENST00000584190 848 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AL391497.1-201ENST00000608671 547 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AC005962.2-201ENST00000611427 652 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AC079395.3-201ENST00000615161 484 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AF117829.1-206ENST00000621883 3802 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 CR381572.1-201ENST00000625098 102 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 MIR492-201ENST00000638676 116 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
VIPAS39Q9H9C1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 RPL23AP57-201ENST00000332361 466 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 RNU6-335P-201ENST00000364563 113 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 SNORA70C-201ENST00000384538 135 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 RNU6-837P-201ENST00000391056 108 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AL022722.2-201ENST00000402519 180 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 MIR1284-201ENST00000408337 120 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 Y_RNA.625-201ENST00000411256 107 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 SETP5-201ENST00000437270 562 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms