Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 MTND1P14-201ENST00000427400 950 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC006946.1-201ENST00000429106 328 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AF228730.2-201ENST00000438784 848 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC092013.1-201ENST00000438795 332 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 NFU1P2-201ENST00000448700 469 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AL162388.1-201ENST00000450912 352 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 RPL36AP13-201ENST00000457490 317 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC010307.1-201ENST00000467206 836 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC092989.1-201ENST00000481235 277 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC069439.1-201ENST00000494739 167 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC005912.1-201ENST00000495392 255 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 ARL2BPP6-201ENST00000512757 439 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 RNU6-314P-201ENST00000516574 104 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 TRMT10BP1-201ENST00000519377 943 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 OR5AK1P-201ENST00000524837 922 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 DEFB108A-201ENST00000530110 222 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC068446.3-201ENST00000555285 382 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AL121772.2-201ENST00000614331 297 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC006338.1-201ENST00000618453 749 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.15□□□□□ -1.74
EBF3Q9H4W6 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
EBF3Q9H4W6 Z73965.1-201ENST00000623412 2297 ntBASIC4.15□□□□□ -1.74
EBF3Q9H4W6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
EBF3Q9H4W6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.15□□□□□ -1.74
EBF3Q9H4W6 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
EBF3Q9H4W6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.15□□□□□ -1.74
EBF3Q9H4W6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 Y_RNA.11-201ENST00000362375 109 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 MIR30B-201ENST00000384850 88 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 RNU2-65P-201ENST00000410162 185 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 RNU6-272P-201ENST00000411028 104 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AL513175.1-201ENST00000431492 780 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 USP12PX-201ENST00000432383 1057 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC000111.3-201ENST00000433478 193 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 B3GNT2P1-201ENST00000434960 952 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC004865.1-201ENST00000442276 1003 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 RAB11AP1-201ENST00000442978 646 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 FDX1P2-201ENST00000450769 375 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 ARPC3P2-201ENST00000457786 533 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 RPL21P71-201ENST00000465598 459 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC146507.1-201ENST00000468335 354 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 RPL7P38-201ENST00000488396 739 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AL358832.1-201ENST00000497800 389 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC108941.1-201ENST00000502853 530 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 OR5H5P-201ENST00000503164 928 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 FGF7P1-201ENST00000582820 288 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC025946.2-201ENST00000603398 234 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC010200.2-201ENST00000605098 235 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC092954.2-201ENST00000609103 430 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC243756.2-201ENST00000618406 463 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 FP236240.3-201ENST00000623061 327 ntBASIC4.15□□□□□ -1.75
EBF3Q9H4W6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
EBF3Q9H4W6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms