Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 MTND5P28-201ENST00000438005 1594 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AC025125.1-201ENST00000624743 1922 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 GNG5P1-201ENST00000255500 204 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 Y_RNA.472-201ENST00000384322 102 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 SNORA44-201ENST00000384584 132 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 MIR153-1-201ENST00000384914 90 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 Y_RNA.578-201ENST00000390903 88 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 BTBD10P2-201ENST00000404779 676 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 FCF1P2-201ENST00000415284 583 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 RAC1P8-201ENST00000427086 527 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 GTF2IP7-202ENST00000436677 309 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AL645638.1-201ENST00000440519 361 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AL031313.1-201ENST00000448435 256 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 snoU13.24-201ENST00000458998 104 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AP000873.1-201ENST00000463987 400 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AC079203.1-201ENST00000487972 404 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 DYNLL1P6-201ENST00000503440 264 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AC093331.1-201ENST00000521474 169 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AP001207.1-201ENST00000524051 481 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 MTCYBP28-201ENST00000566728 1132 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 MTND1P8-201ENST00000571424 950 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AC015871.2-201ENST00000603605 948 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 PART1_2.1-201ENST00000612397 250 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AC018816.2-201ENST00000621460 353 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 AC098679.5-201ENST00000624394 571 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 FAM157B-203ENST00000639350 358 ntBASIC3.47□□□□□ -1.85
RNF41Q9H4P4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF41Q9H4P4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AC106754.1-201ENST00000562632 1513 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 ZNF29P-201ENST00000225587 168 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 RNU6-251P-201ENST00000363235 104 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 RNU6-444P-201ENST00000383988 108 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 RNU6-441P-201ENST00000384545 106 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 SNORA40.2-201ENST00000390847 128 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AC096664.2-201ENST00000411843 406 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 RPS3AP9-201ENST00000417027 792 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 RPS15AP40-201ENST00000419621 391 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 MTCYBP31-201ENST00000438855 1122 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AL162389.1-201ENST00000449233 177 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AC079776.3-201ENST00000450665 370 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 RPL9P32-201ENST00000464118 620 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AL136126.1-201ENST00000473603 402 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 RPL7P23-201ENST00000493874 747 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 RN7SKP277-201ENST00000516895 283 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 LRRC6P1-201ENST00000532188 885 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 OR8K4P-201ENST00000534608 872 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AL049838.1-201ENST00000563647 981 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 MIR5708-201ENST00000579723 85 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 LLPHP1-201ENST00000603571 367 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 RPP40P2-201ENST00000603596 712 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 RNU4-5P-201ENST00000607255 135 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AL157392.4-201ENST00000609756 345 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AC117529.2-201ENST00000512159 2068 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 AC011978.2-201ENST00000569835 2054 ntBASIC3.46□□□□□ -1.86
RNF41Q9H4P4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
RNF41Q9H4P4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 SNORD65.1-201ENST00000390889 71 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 UBA52P6-201ENST00000399822 382 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
RNF41Q9H4P4 U3.42-201ENST00000408746 214 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 RN7SKP58-201ENST00000411010 305 ntBASIC3.45□□□□□ -1.86
RNF41Q9H4P4 EEF1A1P41-201ENST00000414667 207 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms