Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 PTMAP2-201ENST00000397627 327 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AL121972.1-201ENST00000402023 252 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 BTBD10P2-201ENST00000404779 676 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.08□□□□□ -1.76
CDT1Q9H211 RNA5SP239-201ENST00000410218 129 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.08□□□□□ -1.76
CDT1Q9H211 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDT1Q9H211 AL389915.1-201ENST00000422463 466 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.08□□□□□ -1.76
CDT1Q9H211 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.08□□□□□ -1.76
CDT1Q9H211 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDT1Q9H211 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 GOT2P5-201ENST00000433995 546 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 MTND1P4-201ENST00000435196 415 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AL353748.1-201ENST00000440753 474 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 BMI1P1-201ENST00000445879 941 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AC073587.1-201ENST00000447093 876 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AC104073.1-201ENST00000451988 151 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 TPT1P7-201ENST00000458300 517 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 RNU6-956P-201ENST00000458868 103 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AC022034.3-201ENST00000471393 478 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AC087385.1-201ENST00000475062 312 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AP000926.1-201ENST00000479573 241 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.08□□□□□ -1.76
CDT1Q9H211 AP002812.1-201ENST00000495378 474 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 TMEM251P1-201ENST00000503717 318 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.08□□□□□ -1.76
CDT1Q9H211 RNU1-95P-201ENST00000516357 160 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 RNU1-128P-201ENST00000516704 160 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 PTP4A1P6-201ENST00000531034 478 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.08□□□□□ -1.76
CDT1Q9H211 OR6C7P-201ENST00000547875 934 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.08□□□□□ -1.76
CDT1Q9H211 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
CDT1Q9H211 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.08□□□□□ -1.76
CDT1Q9H211 MIR4429-201ENST00000580105 73 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 MAGOH2P-202ENST00000584384 429 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.08□□□□□ -1.76
CDT1Q9H211 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.08□□□□□ -1.76
CDT1Q9H211 AC128687.1-201ENST00000605304 619 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AC090186.1-201ENST00000605991 572 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AC106028.5-201ENST00000610332 395 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AC010678.1-201ENST00000614118 713 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.08□□□□□ -1.76
CDT1Q9H211 AC018755.4-201ENST00000619715 454 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.08□□□□□ -1.76
CDT1Q9H211 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDT1Q9H211 OR4G11P-202ENST00000642116 1414 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CDT1Q9H211 MAPK10-372ENST00000641954 3413 ntBASIC4.08□□□□□ -1.76
CDT1Q9H211 AC130650.2-201ENST00000618736 2403 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 BDP1P-201ENST00000582658 1990 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 AC027514.1-201ENST00000588561 1603 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDT1Q9H211 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDT1Q9H211 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.07□□□□□ -1.76
CDT1Q9H211 AL133412.1-201ENST00000380194 2992 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.07□□□□□ -1.76
CDT1Q9H211 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDT1Q9H211 RNU6-723P-201ENST00000383973 107 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 SNORA5A-201ENST00000384111 134 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDT1Q9H211 HLFP1-201ENST00000402375 499 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 AL603766.1-201ENST00000407763 664 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 RNA5SP104-201ENST00000410989 118 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.07□□□□□ -1.76
CDT1Q9H211 RAD23BP2-201ENST00000416003 1207 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.07□□□□□ -1.76
CDT1Q9H211 RPL7P30-201ENST00000420888 709 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 Z99497.1-201ENST00000421282 135 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 MTND1P30-201ENST00000441241 901 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.07□□□□□ -1.76
CDT1Q9H211 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.07□□□□□ -1.76
CDT1Q9H211 MEMO1P3-201ENST00000459811 302 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 SRRM1P2-201ENST00000464531 1192 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 AC034236.1-201ENST00000469891 373 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.07□□□□□ -1.76
CDT1Q9H211 TRBV12-2-201ENST00000489763 344 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 AC114981.1-201ENST00000503897 678 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 AC139783.2-201ENST00000504847 1145 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.07□□□□□ -1.76
CDT1Q9H211 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.07□□□□□ -1.76
CDT1Q9H211 AC109458.1-201ENST00000508858 316 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.07□□□□□ -1.76
CDT1Q9H211 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.07□□□□□ -1.76
CDT1Q9H211 AC136618.2-201ENST00000575091 400 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.07□□□□□ -1.76
CDT1Q9H211 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.07□□□□□ -1.76
CDT1Q9H211 RNU6-88P-201ENST00000606801 100 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDT1Q9H211 Z99129.1-201ENST00000612510 255 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 AL590240.3-201ENST00000621416 943 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.07□□□□□ -1.76
CDT1Q9H211 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.07□□□□□ -1.76
CDT1Q9H211 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.07□□□□□ -1.76
CDT1Q9H211 FAM157B-203ENST00000639350 358 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDT1Q9H211 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.07□□□□□ -1.76
CDT1Q9H211 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms