Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 RPL26P30-202ENST00000602923 645 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC121334.2-201ENST00000605387 271 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AL121932.1-201ENST00000605542 214 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC010205.1-201ENST00000616668 449 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AL354950.2-201ENST00000617939 290 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC090971.5-201ENST00000621102 293 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC091953.2-201ENST00000623979 160 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AL596275.2-204ENST00000641628 552 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AL596275.2-206ENST00000641957 626 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AC092125.1-201ENST00000562568 1995 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 AL049780.3-201ENST00000624612 1583 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 LARP1BP1-201ENST00000506036 1359 ntBASIC5.03□□□□□ -1.6
RNF38Q9H0F5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RNF38Q9H0F5 RIOK3P1-201ENST00000418778 1528 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 SAGE4P-201ENST00000442271 3381 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 KPNA2P2-201ENST00000419546 1489 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC000123.3-201ENST00000624029 4975 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AL590240.1-201ENST00000334118 313 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 SNORA63C-201ENST00000364578 129 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 MIR141-201ENST00000384975 95 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 ENSAP1-201ENST00000392855 326 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 GLULP6-201ENST00000399502 913 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AL031679.1-201ENST00000400616 525 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 MIR298-201ENST00000401212 88 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AL024474.1-201ENST00000404655 591 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 RN7SKP140-201ENST00000411196 284 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 MTND3P8-201ENST00000412909 339 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC119751.6-201ENST00000416712 186 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC009161.1-201ENST00000417306 376 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC069213.2-201ENST00000420238 366 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 IFNA20P-201ENST00000436840 528 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC104651.2-201ENST00000447549 528 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 TPT1P13-201ENST00000449760 499 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 CACYBPP2-201ENST00000453625 678 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 RN7SL354P-201ENST00000469282 294 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AL136126.1-201ENST00000473603 402 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 EIF4EP3-201ENST00000498782 656 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 PDCD5P1-201ENST00000543528 309 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 MIR5699-201ENST00000578903 90 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 MIR3118-1-201ENST00000581787 76 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC006504.6-201ENST00000590142 199 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC007566.2-201ENST00000603642 413 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AC105429.2-201ENST00000610567 517 ntBASIC5.02□□□□□ -1.61
RNF38Q9H0F5 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF38Q9H0F5 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 AC104623.2-202ENST00000623477 4002 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 RNU1-32P-201ENST00000363937 159 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 MIR1-2-201ENST00000384961 85 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 MIR548P-201ENST00000408336 84 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 RN7SKP106-201ENST00000410832 272 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 AC236972.2-201ENST00000434979 310 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 RNU7-63P-201ENST00000459054 62 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 RN7SL517P-201ENST00000462240 305 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 MTND4P17-201ENST00000470444 350 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 RPS15AP36-201ENST00000492022 382 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 RN7SL558P-201ENST00000497468 299 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 NPM1P41-201ENST00000512920 831 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 RNU4-49P-201ENST00000516080 140 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 AC022616.3-201ENST00000523940 148 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms