Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.85□□□□□ -2.11
COL12A1Q99715 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
COL12A1Q99715 AC093909.5-201ENST00000621839 1799 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL12A1Q99715 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
COL12A1Q99715 KPNA2P1-201ENST00000458289 1591 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
COL12A1Q99715 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.85□□□□□ -2.11
COL12A1Q99715 MIR181B1-201ENST00000385240 110 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 MIR708-201ENST00000390708 88 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
COL12A1Q99715 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.85□□□□□ -2.11
COL12A1Q99715 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.85□□□□□ -2.11
COL12A1Q99715 AC092185.1-201ENST00000491371 97 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.85□□□□□ -2.11
COL12A1Q99715 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.85□□□□□ -2.11
COL12A1Q99715 AC122134.1-201ENST00000565664 1104 ntBASIC1.85□□□□□ -2.11
COL12A1Q99715 MTCO1P7-201ENST00000419523 1542 ntBASIC1.84□□□□□ -2.11
COL12A1Q99715 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
COL12A1Q99715 AC008432.1-201ENST00000615912 1320 ntBASIC1.84□□□□□ -2.11
COL12A1Q99715 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.84□□□□□ -2.11
COL12A1Q99715 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.84□□□□□ -2.11
COL12A1Q99715 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
COL12A1Q99715 RNU1-57P-201ENST00000384491 166 ntBASIC1.84□□□□□ -2.11
COL12A1Q99715 MIR9-3-201ENST00000385084 90 ntBASIC1.84□□□□□ -2.11
COL12A1Q99715 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.84□□□□□ -2.11
COL12A1Q99715 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.84□□□□□ -2.11
COL12A1Q99715 RPS7P5-201ENST00000441482 581 ntBASIC1.84□□□□□ -2.11
COL12A1Q99715 AC245517.2-201ENST00000442890 346 ntBASIC1.84□□□□□ -2.11
COL12A1Q99715 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.84□□□□□ -2.11
COL12A1Q99715 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.84□□□□□ -2.11
COL12A1Q99715 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.84□□□□□ -2.11
COL12A1Q99715 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
COL12A1Q99715 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
COL12A1Q99715 RPS3AP9-201ENST00000417027 792 ntBASIC1.84□□□□□ -2.12
COL12A1Q99715 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.84□□□□□ -2.12
COL12A1Q99715 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.84□□□□□ -2.12
COL12A1Q99715 MIR3683-201ENST00000580847 82 ntBASIC1.84□□□□□ -2.12
COL12A1Q99715 AL359198.2-201ENST00000611836 194 ntBASIC1.84□□□□□ -2.12
COL12A1Q99715 MIR6733-201ENST00000635723 61 ntBASIC1.84□□□□□ -2.12
COL12A1Q99715 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL12A1Q99715 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.83□□□□□ -2.12
COL12A1Q99715 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
COL12A1Q99715 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
COL12A1Q99715 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL12A1Q99715 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL12A1Q99715 SNORA67.5-201ENST00000391036 107 ntBASIC1.83□□□□□ -2.12
COL12A1Q99715 HMGN1P33-201ENST00000432945 451 ntBASIC1.83□□□□□ -2.12
COL12A1Q99715 PPP1R2P5-201ENST00000457256 603 ntBASIC1.83□□□□□ -2.12
COL12A1Q99715 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.83□□□□□ -2.12
COL12A1Q99715 HIGD1AP10-201ENST00000527837 282 ntBASIC1.83□□□□□ -2.12
COL12A1Q99715 AC025281.1-201ENST00000567026 265 ntBASIC1.83□□□□□ -2.12
COL12A1Q99715 FRG1DP-201ENST00000635586 771 ntBASIC1.83□□□□□ -2.12
COL12A1Q99715 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.83□□□□□ -2.12
COL12A1Q99715 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL12A1Q99715 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.83□□□□□ -2.12
COL12A1Q99715 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.83□□□□□ -2.12
COL12A1Q99715 RNA5SP102-201ENST00000516865 106 ntBASIC1.83□□□□□ -2.12
COL12A1Q99715 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.83□□□□□ -2.12
COL12A1Q99715 DNAJC19P9-201ENST00000555084 351 ntBASIC1.83□□□□□ -2.12
COL12A1Q99715 AC110588.1-201ENST00000559699 137 ntBASIC1.83□□□□□ -2.12
COL12A1Q99715 BX664608.1-201ENST00000610519 487 ntBASIC1.83□□□□□ -2.12
COL12A1Q99715 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.83□□□□□ -2.12
COL12A1Q99715 MTND5P23-201ENST00000430812 1655 ntBASIC1.83□□□□□ -2.12
COL12A1Q99715 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL12A1Q99715 Y_RNA.36-201ENST00000362602 112 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
COL12A1Q99715 RPAP2P1-201ENST00000603626 1168 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 PVT1_3.1-201ENST00000620853 95 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL12A1Q99715 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 FO393414.1-201ENST00000428697 1184 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 AL590762.3-201ENST00000436372 640 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.82□□□□□ -2.12
COL12A1Q99715 AC125238.1-201ENST00000448842 249 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 RNU1-123P-201ENST00000458950 160 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.82□□□□□ -2.12
COL12A1Q99715 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.82□□□□□ -2.12
COL12A1Q99715 AC005730.3-201ENST00000583067 366 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 BMS1P7-201ENST00000602440 1052 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 SNRPGP19-201ENST00000603826 189 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 AC091834.1-201ENST00000614543 472 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
COL12A1Q99715 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL12A1Q99715 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.82□□□□□ -2.12
COL12A1Q99715 AL390023.1-201ENST00000428836 262 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 MTND2P29-201ENST00000438595 412 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.82□□□□□ -2.12
COL12A1Q99715 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.82□□□□□ -2.12
COL12A1Q99715 POU5F1P7-201ENST00000508759 541 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 AC005951.1-201ENST00000576706 485 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.82□□□□□ -2.12
COL12A1Q99715 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.82□□□□□ -2.12
COL12A1Q99715 MIR6766-201ENST00000622641 72 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.82□□□□□ -2.12
COL12A1Q99715 AC012078.1-201ENST00000405035 1646 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 CDC27P2-201ENST00000425026 1922 ntBASIC1.82□□□□□ -2.12
COL12A1Q99715 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
COL12A1Q99715 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms