Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUP88Q99567 RN7SL132P-201ENST00000478131 296 ntBASIC4.77□□□□□ -1.65
NUP88Q99567 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.77□□□□□ -1.65
NUP88Q99567 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP88Q99567 RNU1-45P-201ENST00000517191 141 ntBASIC4.77□□□□□ -1.65
NUP88Q99567 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP88Q99567 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.77□□□□□ -1.65
NUP88Q99567 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP88Q99567 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.77□□□□□ -1.65
NUP88Q99567 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP88Q99567 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.77□□□□□ -1.65
NUP88Q99567 AC137800.2-201ENST00000574375 120 ntBASIC4.77□□□□□ -1.65
NUP88Q99567 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP88Q99567 AC079089.3-201ENST00000603094 673 ntBASIC4.77□□□□□ -1.65
NUP88Q99567 AL606490.9-201ENST00000603331 271 ntBASIC4.77□□□□□ -1.65
NUP88Q99567 AC112191.3-201ENST00000604371 277 ntBASIC4.77□□□□□ -1.65
NUP88Q99567 IGHV3-29-201ENST00000604817 344 ntBASIC4.77□□□□□ -1.65
NUP88Q99567 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUP88Q99567 AC099842.1-201ENST00000619919 596 ntBASIC4.77□□□□□ -1.65
NUP88Q99567 AL139089.1-201ENST00000620372 975 ntBASIC4.77□□□□□ -1.65
NUP88Q99567 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP88Q99567 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.77□□□□□ -1.65
NUP88Q99567 AC084035.1-201ENST00000634543 607 ntBASIC4.77□□□□□ -1.65
NUP88Q99567 OR5BE1P-202ENST00000641168 1176 ntBASIC4.77□□□□□ -1.65
NUP88Q99567 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP88Q99567 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP88Q99567 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
NUP88Q99567 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUP88Q99567 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUP88Q99567 CCT4P2-201ENST00000233836 1548 ntBASIC4.77□□□□□ -1.65
NUP88Q99567 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.77□□□□□ -1.65
NUP88Q99567 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.76□□□□□ -1.65
NUP88Q99567 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.76□□□□□ -1.65
NUP88Q99567 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.76□□□□□ -1.65
NUP88Q99567 AC027287.1-201ENST00000553115 1453 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.76□□□□□ -1.65
NUP88Q99567 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP88Q99567 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP88Q99567 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP88Q99567 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP88Q99567 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP88Q99567 RHOT1P2-201ENST00000366423 333 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AL359837.1-201ENST00000381357 287 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 RNU6-1042P-201ENST00000384204 107 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 RNU6-837P-201ENST00000391056 108 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.76□□□□□ -1.65
NUP88Q99567 AL359704.1-201ENST00000411586 781 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 CYCSP19-201ENST00000411715 316 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AIMP1P1-201ENST00000418670 937 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AL691449.1-201ENST00000426570 421 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.76□□□□□ -1.65
NUP88Q99567 AL358472.1-201ENST00000431295 329 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP88Q99567 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.76□□□□□ -1.65
NUP88Q99567 snoU109.1-201ENST00000459339 135 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 RPL38P1-201ENST00000460914 211 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AC010469.1-201ENST00000463864 576 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP88Q99567 AC146944.2-203ENST00000502493 354 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.76□□□□□ -1.65
NUP88Q99567 TMEM248P1-201ENST00000510579 951 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 NPM1P41-201ENST00000512920 831 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AC139495.1-202ENST00000513164 354 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP88Q99567 OR5M7P-201ENST00000526140 972 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AP002963.1-201ENST00000530590 184 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.76□□□□□ -1.65
NUP88Q99567 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP88Q99567 ZNF519P3-201ENST00000557158 1032 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AC034268.2-201ENST00000571784 482 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 RPL23AP87-202ENST00000573039 466 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 MIR5684-201ENST00000585074 65 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AC087683.1-201ENST00000591187 441 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
NUP88Q99567 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.76□□□□□ -1.65
NUP88Q99567 AC006566.1-201ENST00000608943 513 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 MIR6868-201ENST00000611215 58 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AL590099.1-201ENST00000615276 138 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 AC108479.2-201ENST00000617314 601 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NUP88Q99567 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP88Q99567 AC016588.2-201ENST00000632484 3021 ntBASIC4.76□□□□□ -1.65
NUP88Q99567 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
NUP88Q99567 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP88Q99567 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NUP88Q99567 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP88Q99567 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
NUP88Q99567 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
NUP88Q99567 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP88Q99567 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP88Q99567 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
NUP88Q99567 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NUP88Q99567 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP88Q99567 RNU6-1119P-201ENST00000384349 108 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 MIR93-201ENST00000385024 80 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NUP88Q99567 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP88Q99567 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP88Q99567 RBMY1KP-201ENST00000423480 476 ntBASIC4.75□□□□□ -1.65
NUP88Q99567 NANOGP6-201ENST00000429190 847 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms