Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RPL7P52-201ENST00000449200 742 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC010733.1-201ENST00000451515 401 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 HMGB3P21-201ENST00000452483 547 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 PARP4P3-201ENST00000510265 317 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC093677.1-201ENST00000514414 678 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC093853.1-201ENST00000515689 483 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 Y_RNA.704-201ENST00000516851 102 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SNX18Q96RF0 AP001880.2-201ENST00000538233 448 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 HMGB1P33-201ENST00000563485 527 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 AL360157.1-201ENST00000565962 87 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC090615.1-201ENST00000577519 154 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 RN7SL652P-201ENST00000577769 300 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC091905.1-201ENST00000624400 311 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX18Q96RF0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX18Q96RF0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX18Q96RF0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX18Q96RF0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SNX18Q96RF0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX18Q96RF0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX18Q96RF0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX18Q96RF0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 RN7SKP100-201ENST00000411258 284 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC078974.1-201ENST00000411597 223 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 RSU1P3-201ENST00000412878 835 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AMD1P2-201ENST00000412936 992 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 JKAMPP1-201ENST00000413804 919 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC069213.2-201ENST00000420238 366 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 AL138785.1-201ENST00000425821 331 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 MTCO2P19-201ENST00000427513 598 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC002486.1-201ENST00000435098 391 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC104850.1-201ENST00000435940 476 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC016831.4-201ENST00000438302 307 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 CBX1P1-201ENST00000440184 427 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 snoU13.8-201ENST00000458890 104 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 RPL7P15-201ENST00000461190 712 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC007182.2-201ENST00000489251 402 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 SNORD116-26-201ENST00000516006 96 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 RNU6-201P-201ENST00000517100 61 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 PTP4A1P6-201ENST00000531034 478 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC123904.2-201ENST00000548059 300 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 AL845331.3-202ENST00000562856 261 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC107954.1-201ENST00000565906 727 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC020914.4-201ENST00000597690 277 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AP002360.3-201ENST00000607673 710 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 MIR378J-201ENST00000611988 109 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC002553.4-201ENST00000616896 331 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC009159.1-201ENST00000618386 642 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC092794.2-201ENST00000620933 563 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 MIR6715B-201ENST00000637172 77 ntBASIC4.12□□□□□ -1.75
SNX18Q96RF0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX18Q96RF0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SNX18Q96RF0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 AC024560.2-201ENST00000507981 1497 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SNX18Q96RF0 MIR298-201ENST00000401212 88 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 MRPL42P2-201ENST00000403169 426 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 RNU2-15P-201ENST00000410692 191 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 AL359704.1-201ENST00000411586 781 ntBASIC4.11□□□□□ -1.75
SNX18Q96RF0 AC127391.1-201ENST00000411737 98 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms