Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 SNORA70C-201ENST00000384538 135 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 MIR921-201ENST00000401133 56 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC008280.1-201ENST00000418851 412 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DUX3Q96PT4 USP9YP18-201ENST00000425912 695 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 RPL21P91-201ENST00000429231 479 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 RPS27AP12-201ENST00000429552 465 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 HMGB1P31-201ENST00000437242 427 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 VN1R34P-201ENST00000447387 883 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 FGF7P6-202ENST00000451282 293 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DUX3Q96PT4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC009963.2-201ENST00000453431 138 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 RPL7P22-201ENST00000466005 733 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC010301.1-201ENST00000473936 355 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 RPL23AP65-201ENST00000475608 468 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC012158.1-204ENST00000483430 465 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC091167.1-201ENST00000492017 396 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 POU5F1P7-201ENST00000508759 541 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 SNORA70.14-201ENST00000516205 110 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 Y_RNA.704-201ENST00000516851 102 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 SOD1P3-201ENST00000518682 454 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC022878.1-201ENST00000530684 149 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 AL365503.1-201ENST00000605247 905 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC110741.2-201ENST00000605278 268 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 Z98200.1-201ENST00000607298 470 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 AL359314.1-201ENST00000616913 261 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 U6.42-201ENST00000618440 107 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 AL356321.1-201ENST00000621360 228 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 AC140479.6-201ENST00000633535 357 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DUX3Q96PT4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DUX3Q96PT4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 LINC02471-203ENST00000641941 4752 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.35□□□□□ -1.87
DUX3Q96PT4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.35□□□□□ -1.87
DUX3Q96PT4 AC006378.2-201ENST00000623178 2476 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
DUX3Q96PT4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
DUX3Q96PT4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
DUX3Q96PT4 U8.3-201ENST00000363321 132 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 Y_RNA.126-201ENST00000363382 111 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 RNA5SP366-201ENST00000365454 123 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 RNA5SP151-201ENST00000365632 117 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
DUX3Q96PT4 MIR195-201ENST00000385194 87 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 MIR3065-201ENST00000390137 79 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 RPS26P8-201ENST00000393490 348 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 RPS20P2-201ENST00000402520 389 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 AL590002.1-201ENST00000406554 418 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 RAP1BP3-201ENST00000407180 549 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 MIR1277-201ENST00000408536 78 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
DUX3Q96PT4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
DUX3Q96PT4 MTATP6P27-201ENST00000416987 621 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 C1DP2-201ENST00000418167 426 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 AC004552.1-201ENST00000419089 348 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
DUX3Q96PT4 AL391219.1-201ENST00000422570 483 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 AL589872.1-201ENST00000426602 288 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.35□□□□□ -1.87
DUX3Q96PT4 RPEP2-201ENST00000432149 701 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.35□□□□□ -1.87
DUX3Q96PT4 CEACAMP1-201ENST00000434624 1035 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 MTND4LP10-201ENST00000435146 291 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 RSU1P2-202ENST00000437884 485 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 AL121601.2-201ENST00000438019 707 ntBASIC3.35□□□□□ -1.87
DUX3Q96PT4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
DUX3Q96PT4 MTND6P13-201ENST00000443510 523 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms