Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 RN7SKP123-201ENST00000410732 291 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AL024507.1-201ENST00000412741 274 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AL136133.1-201ENST00000413694 376 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 MTCO3P12-201ENST00000416718 547 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC233728.2-201ENST00000425348 757 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC011242.1-201ENST00000433596 1158 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 TRIM60P18-201ENST00000441518 828 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AL671855.1-201ENST00000446875 1203 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC068724.1-201ENST00000487100 792 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC084024.2-201ENST00000503480 791 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC104027.1-201ENST00000521887 300 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 MIR4666A-201ENST00000580160 79 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 MIR3200-201ENST00000580767 85 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC008507.1-201ENST00000587506 734 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC078899.3-201ENST00000599065 212 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 RPAP2P1-201ENST00000603626 1168 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AP000238.1-201ENST00000608759 426 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AP005137.2-201ENST00000609238 400 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AL110115.1-201ENST00000614396 364 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC018755.4-201ENST00000619715 454 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC068880.4-201ENST00000623082 495 ntBASIC3.22□□□□□ -1.89
RPRD1AQ96P16 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RPRD1AQ96P16 AC244517.1-201ENST00000606030 2086 ntBASIC3.21□□□□□ -1.89
RPRD1AQ96P16 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 RNU1-101P-201ENST00000391171 127 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 U3.29-201ENST00000391296 212 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 MCTS2P-201ENST00000394552 546 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 RNU6-1077P-201ENST00000410506 102 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 RNU6-712P-201ENST00000410558 100 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AL133384.1-201ENST00000412744 351 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC109780.2-201ENST00000413467 845 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 RPL32P35-201ENST00000415214 394 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 SDCBPP3-201ENST00000419629 891 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 YPEL5P1-201ENST00000419731 367 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 MTCYBP32-201ENST00000427945 1084 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 RABEPKP1-201ENST00000440529 1026 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC016696.1-201ENST00000446949 318 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 snoU13.4-201ENST00000458916 104 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 GAPDHP39-201ENST00000481866 979 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 RN7SL283P-201ENST00000489055 303 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 RNU5A-7P-201ENST00000515979 116 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 SNORA64.4-201ENST00000516632 81 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 RNU6-711P-201ENST00000517255 106 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AP001207.2-201ENST00000519490 539 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC126177.3-201ENST00000551839 688 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC093519.1-201ENST00000566109 298 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 AC068831.7-201ENST00000616954 363 ntBASIC3.21□□□□□ -1.9
RPRD1AQ96P16 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
RPRD1AQ96P16 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 SNORD67-201ENST00000390833 111 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AC110754.1-201ENST00000399740 601 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AC245291.1-201ENST00000419501 328 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AC006960.1-201ENST00000419980 153 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 HSPE1P1-201ENST00000421494 318 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms