Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC074101.1-201ENST00000637861 241 ntBASIC6.37□□□□□ -1.39
TRIM47Q96LD4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM47Q96LD4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM47Q96LD4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM47Q96LD4 AL355488.2-201ENST00000609909 2850 ntBASIC6.37□□□□□ -1.39
TRIM47Q96LD4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AC097504.1-201ENST00000515103 2415 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 RNU6-1029P-201ENST00000384109 107 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 RNU6-39P-201ENST00000384344 107 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 MIR1298-201ENST00000408783 112 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 SNORA11-201ENST00000408789 128 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 POLHP1-201ENST00000411806 470 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 PRUNEP1-201ENST00000425846 705 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 RPS23P2-201ENST00000463671 415 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AC015724.1-201ENST00000478577 156 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AP001025.2-201ENST00000490908 477 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 DUTP1-201ENST00000493631 470 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 SNORA72.7-201ENST00000516349 94 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 IGLV3-24-201ENST00000517477 197 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AP002392.1-201ENST00000537692 208 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 CBX3P4-201ENST00000538909 354 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 MIR4703-201ENST00000577728 79 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 NANOGP3-201ENST00000605855 286 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AL022394.1-201ENST00000606979 292 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AL627230.1-201ENST00000613077 211 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AC109583.2-201ENST00000617367 129 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 AC005183.1-201ENST00000603687 1979 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 ZNF285B-201ENST00000561698 1767 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 PWAR1-201ENST00000624188 2414 ntBASIC6.36□□□□□ -1.39
TRIM47Q96LD4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM47Q96LD4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 PANDAR-201ENST00000629595 1506 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AC114947.2-201ENST00000565748 2125 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 Y_RNA.83-201ENST00000363005 113 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 Y_RNA.126-201ENST00000363382 111 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 RNU6-682P-201ENST00000363843 106 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 RNU6-82P-201ENST00000363970 107 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 RNU6-398P-201ENST00000384143 109 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 RNU1-136P-201ENST00000384181 164 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 SNORA16A-201ENST00000384342 137 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 Y_RNA.551-201ENST00000384661 102 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AC245028.1-201ENST00000423259 256 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 RPL12P34-201ENST00000424532 479 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AL360081.1-201ENST00000428299 555 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AC099670.2-201ENST00000435130 321 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AC093716.1-201ENST00000435923 377 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 RPS3AP12-201ENST00000443616 753 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AC004980.3-201ENST00000447046 365 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 RPL31P50-201ENST00000471002 296 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AC074198.2-201ENST00000508153 258 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 RNU7-200P-201ENST00000516105 62 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 SNORA40.14-201ENST00000516543 86 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 MIR5188-201ENST00000583467 113 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AC069307.1-201ENST00000602820 447 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AC087783.2-201ENST00000605070 562 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AC015712.7-201ENST00000615211 635 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AL138825.1-201ENST00000618587 192 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 MIR4272-201ENST00000635924 64 ntBASIC6.35□□□□□ -1.39
TRIM47Q96LD4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM47Q96LD4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
TRIM47Q96LD4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms