Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SNORD3E-201ENST00000362899 217 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 Y_RNA.80-201ENST00000362996 102 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 RN7SKP124-201ENST00000364730 341 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 DEFB109C-201ENST00000382575 264 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 DEFB109B-201ENST00000382656 264 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 Y_RNA.463-201ENST00000384271 102 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 RNU4-70P-201ENST00000384579 139 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 AL109755.1-201ENST00000401791 649 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC096921.1-201ENST00000411661 375 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC016769.2-201ENST00000414815 475 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.72□□□□□ -1.49
IFT43Q96FT9 AL139095.3-201ENST00000419672 1203 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC093151.1-201ENST00000427711 313 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC093106.2-201ENST00000428212 385 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.72□□□□□ -1.49
IFT43Q96FT9 RPS27AP1-201ENST00000475545 471 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 GLUD1P3-202ENST00000508551 200 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 RNU6-685P-201ENST00000517088 95 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.72□□□□□ -1.49
IFT43Q96FT9 RANP3-201ENST00000530970 276 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC106782.4-201ENST00000568264 210 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.72□□□□□ -1.49
IFT43Q96FT9 MIR1273E-201ENST00000581165 102 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC008521.1-201ENST00000587471 187 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 BNIP3P16-201ENST00000589779 534 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC006157.1-201ENST00000611750 366 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 MIR6133-201ENST00000617057 108 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
IFT43Q96FT9 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
IFT43Q96FT9 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC093775.1-201ENST00000624154 1868 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
IFT43Q96FT9 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
IFT43Q96FT9 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.49
IFT43Q96FT9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
IFT43Q96FT9 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
IFT43Q96FT9 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
IFT43Q96FT9 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.71□□□□□ -1.5
IFT43Q96FT9 AC007842.1-201ENST00000597336 2039 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 AC011755.1-201ENST00000623763 2049 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
IFT43Q96FT9 AL121886.1-201ENST00000358609 435 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 RNU6-562P-201ENST00000362731 107 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 RNU6-1284P-201ENST00000363701 100 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 RNA5SP30-201ENST00000365552 115 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
IFT43Q96FT9 RNU6-637P-201ENST00000384050 107 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 RNU6-328P-201ENST00000390887 106 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 SNORA11B-201ENST00000408175 129 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 RNU4-25P-201ENST00000410569 230 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 RNU4-6P-201ENST00000410804 122 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 Z93019.1-201ENST00000416450 973 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 RNF10P1-201ENST00000418589 369 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.71□□□□□ -1.5
IFT43Q96FT9 RPL5P30-201ENST00000465511 891 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.71□□□□□ -1.5
IFT43Q96FT9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.71□□□□□ -1.5
IFT43Q96FT9 RBBP4P6-201ENST00000508098 202 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.71□□□□□ -1.5
IFT43Q96FT9 AC026782.1-201ENST00000512952 449 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 AC104136.1-201ENST00000512969 394 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 BX510359.5-201ENST00000515651 304 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 RNU6-635P-201ENST00000516651 102 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 RNU6-1016P-201ENST00000516689 94 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 AC027308.1-201ENST00000517993 110 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 AL121576.1-201ENST00000556055 276 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 MIR4489-201ENST00000578869 62 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 MIR4311-201ENST00000580794 100 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 OR7E18P-201ENST00000592589 702 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.71□□□□□ -1.5
IFT43Q96FT9 AL109918.3-201ENST00000603072 338 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 AC011890.2-201ENST00000613393 294 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 PISRT1.1-201ENST00000616930 107 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.71□□□□□ -1.5
IFT43Q96FT9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
IFT43Q96FT9 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.71□□□□□ -1.5
IFT43Q96FT9 AC073136.1-201ENST00000449426 2884 ntBASIC5.71□□□□□ -1.5
IFT43Q96FT9 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
IFT43Q96FT9 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.71□□□□□ -1.5
IFT43Q96FT9 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
IFT43Q96FT9 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
IFT43Q96FT9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
IFT43Q96FT9 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
IFT43Q96FT9 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
IFT43Q96FT9 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
IFT43Q96FT9 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
IFT43Q96FT9 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
IFT43Q96FT9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
IFT43Q96FT9 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
IFT43Q96FT9 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
IFT43Q96FT9 XIAPP3-201ENST00000312918 795 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 RN7SKP162-201ENST00000363605 345 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms