Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AL672167.1-204ENST00000641875 3017 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 MTND5P29-201ENST00000458676 1807 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 MIR153-1-201ENST00000384914 90 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 RPL21P17-201ENST00000397467 475 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 USP9YP14-201ENST00000430663 563 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 RPL22P17-201ENST00000438729 315 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 RPL29P29-201ENST00000448725 423 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AL451050.1-201ENST00000450126 415 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AL033528.1-201ENST00000453780 140 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 SNORD42A-201ENST00000459584 64 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AC074250.1-201ENST00000511117 192 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AC093677.1-201ENST00000514414 678 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AC022878.1-201ENST00000530684 149 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 CYCSP30-201ENST00000546447 172 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AC091805.2-201ENST00000603848 235 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AL136363.2-201ENST00000604173 851 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AC092354.2-201ENST00000607786 514 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AC006566.1-201ENST00000608943 513 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AC005332.10-201ENST00000612725 619 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AL596245.1-201ENST00000618994 362 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AL603839.4-201ENST00000624658 1005 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 U6.105-201ENST00000637379 88 ntBASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM43Q96BQ3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 SCN1A-220ENST00000641603 12506 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 Y_RNA.111-201ENST00000363248 100 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 Y_RNA.493-201ENST00000384422 102 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 MIR1271-201ENST00000408537 86 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 MTCO1P21-201ENST00000416634 589 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AIMP1P1-201ENST00000418670 937 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 RPS11P1-201ENST00000451072 473 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 RPS4XP10-201ENST00000465034 731 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 RN7SKP298-201ENST00000515950 94 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AP003385.6-201ENST00000531603 374 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC037471.2-201ENST00000564941 598 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AL359999.1-201ENST00000604513 294 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 NDUFA8P1-201ENST00000605525 367 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 Z99129.1-201ENST00000612510 255 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC008250.2-201ENST00000615261 205 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 AC005858.4-201ENST00000623191 700 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM43Q96BQ3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM43Q96BQ3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM43Q96BQ3 MAPK10-320ENST00000641462 6696 ntBASIC4.47□□□□□ -1.69
TRIM43Q96BQ3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms