Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.47□□□□□ -1.85
TOPBP1Q92547 OR4R2P-201ENST00000530815 597 ntBASIC3.47□□□□□ -1.85
TOPBP1Q92547 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.47□□□□□ -1.85
TOPBP1Q92547 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.47□□□□□ -1.85
TOPBP1Q92547 AC108479.2-201ENST00000617314 601 ntBASIC3.47□□□□□ -1.85
TOPBP1Q92547 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TOPBP1Q92547 AL359715.4-201ENST00000606629 1436 ntBASIC3.46□□□□□ -1.85
TOPBP1Q92547 RNU6-661P-201ENST00000362409 107 ntBASIC3.46□□□□□ -1.86
TOPBP1Q92547 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TOPBP1Q92547 AC003989.2-201ENST00000440224 169 ntBASIC3.46□□□□□ -1.86
TOPBP1Q92547 RN7SKP34-201ENST00000516142 244 ntBASIC3.46□□□□□ -1.86
TOPBP1Q92547 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.46□□□□□ -1.86
TOPBP1Q92547 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.46□□□□□ -1.86
TOPBP1Q92547 ZNF542P-204ENST00000482727 1305 ntBASIC3.46□□□□□ -1.86
TOPBP1Q92547 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TOPBP1Q92547 MIR378A-201ENST00000362177 66 ntBASIC3.45□□□□□ -1.86
TOPBP1Q92547 MIR365B-201ENST00000362317 111 ntBASIC3.45□□□□□ -1.86
TOPBP1Q92547 RNU1-51P-201ENST00000365345 176 ntBASIC3.45□□□□□ -1.86
TOPBP1Q92547 U8.10-201ENST00000384260 133 ntBASIC3.45□□□□□ -1.86
TOPBP1Q92547 RNA5SP270-201ENST00000411361 118 ntBASIC3.45□□□□□ -1.86
TOPBP1Q92547 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.45□□□□□ -1.86
TOPBP1Q92547 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.45□□□□□ -1.86
TOPBP1Q92547 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TOPBP1Q92547 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.45□□□□□ -1.86
TOPBP1Q92547 MUPP-201ENST00000438111 566 ntBASIC3.45□□□□□ -1.86
TOPBP1Q92547 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.45□□□□□ -1.86
TOPBP1Q92547 AC017007.3-201ENST00000479865 435 ntBASIC3.45□□□□□ -1.86
TOPBP1Q92547 AC092045.1-201ENST00000495716 1231 ntBASIC3.45□□□□□ -1.86
TOPBP1Q92547 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.45□□□□□ -1.86
TOPBP1Q92547 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
TOPBP1Q92547 AC091953.2-201ENST00000623979 160 ntBASIC3.45□□□□□ -1.86
TOPBP1Q92547 CYP3A51P-201ENST00000633513 256 ntBASIC3.45□□□□□ -1.86
TOPBP1Q92547 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TOPBP1Q92547 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TOPBP1Q92547 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.45□□□□□ -1.86
TOPBP1Q92547 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
TOPBP1Q92547 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.45□□□□□ -1.86
TOPBP1Q92547 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TOPBP1Q92547 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TOPBP1Q92547 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TOPBP1Q92547 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.44□□□□□ -1.86
TOPBP1Q92547 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.44□□□□□ -1.86
TOPBP1Q92547 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.44□□□□□ -1.86
TOPBP1Q92547 AC026412.2-201ENST00000512270 1075 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.44□□□□□ -1.86
TOPBP1Q92547 MIR3683-201ENST00000580847 82 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TOPBP1Q92547 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.44□□□□□ -1.86
TOPBP1Q92547 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
TOPBP1Q92547 AC010680.1-201ENST00000590024 3590 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TOPBP1Q92547 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TOPBP1Q92547 MTCO3P31-201ENST00000405526 789 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 MTND4LP21-201ENST00000415303 295 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.44□□□□□ -1.86
TOPBP1Q92547 AC009237.8-201ENST00000445492 379 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.44□□□□□ -1.86
TOPBP1Q92547 FABP5P13-201ENST00000452144 328 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 AL121839.1-201ENST00000556233 1185 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 SNORD39.2-201ENST00000579995 76 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 AL359821.1-201ENST00000605519 182 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 AC120053.1-201ENST00000607706 736 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 AC107294.3-201ENST00000609211 526 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 VN1R7P-201ENST00000619242 903 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 RPL23AP61-201ENST00000623642 466 ntBASIC3.44□□□□□ -1.86
TOPBP1Q92547 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TOPBP1Q92547 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TOPBP1Q92547 RNU1-138P-201ENST00000384093 164 ntBASIC3.43□□□□□ -1.86
TOPBP1Q92547 AL358453.1-201ENST00000422522 250 ntBASIC3.43□□□□□ -1.86
TOPBP1Q92547 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.43□□□□□ -1.86
TOPBP1Q92547 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.43□□□□□ -1.86
TOPBP1Q92547 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.43□□□□□ -1.86
TOPBP1Q92547 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.43□□□□□ -1.86
TOPBP1Q92547 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.43□□□□□ -1.86
TOPBP1Q92547 TRBV8-1-201ENST00000481590 279 ntBASIC3.43□□□□□ -1.86
TOPBP1Q92547 AC015849.6-201ENST00000605454 474 ntBASIC3.43□□□□□ -1.86
TOPBP1Q92547 Y_RNA.783-201ENST00000613546 102 ntBASIC3.43□□□□□ -1.86
TOPBP1Q92547 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.43□□□□□ -1.86
TOPBP1Q92547 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.43□□□□□ -1.86
TOPBP1Q92547 MIR6733-201ENST00000635723 61 ntBASIC3.43□□□□□ -1.86
TOPBP1Q92547 AC107021.2-201ENST00000567714 2095 ntBASIC3.43□□□□□ -1.86
TOPBP1Q92547 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
TOPBP1Q92547 OR10AB1P-202ENST00000641219 1686 ntBASIC3.42□□□□□ -1.86
TOPBP1Q92547 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.42□□□□□ -1.86
TOPBP1Q92547 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TOPBP1Q92547 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TOPBP1Q92547 MIR9-3-201ENST00000385084 90 ntBASIC3.42□□□□□ -1.86
TOPBP1Q92547 AC009302.1-201ENST00000417147 390 ntBASIC3.42□□□□□ -1.86
TOPBP1Q92547 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.42□□□□□ -1.86
TOPBP1Q92547 RWDD4P2-201ENST00000426392 563 ntBASIC3.42□□□□□ -1.86
TOPBP1Q92547 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.42□□□□□ -1.86
TOPBP1Q92547 GSTA11P-201ENST00000452866 669 ntBASIC3.42□□□□□ -1.86
TOPBP1Q92547 RWDD4P1-201ENST00000488019 565 ntBASIC3.42□□□□□ -1.86
TOPBP1Q92547 POU5F1P7-201ENST00000508759 541 ntBASIC3.42□□□□□ -1.86
TOPBP1Q92547 RNA5SP182-201ENST00000516064 82 ntBASIC3.42□□□□□ -1.86
TOPBP1Q92547 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.42□□□□□ -1.86
TOPBP1Q92547 RPAP2P1-201ENST00000603626 1168 ntBASIC3.42□□□□□ -1.86
TOPBP1Q92547 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.42□□□□□ -1.86
TOPBP1Q92547 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TOPBP1Q92547 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms