Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC021006.3-201ENST00000530771 192 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AP000907.2-201ENST00000530827 353 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AC109635.4-202ENST00000531666 412 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AC022884.3-201ENST00000579571 248 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AC008013.2-202ENST00000637965 364 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 AL121950.1-201ENST00000624993 2077 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 KPNA2P1-201ENST00000458289 1591 ntBASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHKBP1Q8TBC3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AP005432.1-201ENST00000580891 3485 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 RNU2-29P-201ENST00000410423 189 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 OR6C66P-201ENST00000414917 930 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 RPL36AP36-201ENST00000418616 301 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AC012065.2-201ENST00000421295 375 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 RPS24P8-201ENST00000431490 402 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AC010881.1-201ENST00000433830 235 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 HSFY6P-201ENST00000445573 403 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AL035551.1-201ENST00000446931 348 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AC020550.1-201ENST00000447385 163 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 NANOGP10-201ENST00000453325 895 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AC092451.1-201ENST00000480211 153 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 Y_RNA.654-201ENST00000497848 106 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AC140172.1-201ENST00000502928 141 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 COX6B1P5-201ENST00000509843 249 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AL671862.1-201ENST00000515851 349 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 IGKV2-36-201ENST00000519999 223 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AC090136.1-201ENST00000520009 240 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AP003497.1-201ENST00000528472 562 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AP000763.2-201ENST00000540641 163 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 MIR4775-201ENST00000581168 75 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AL353997.4-201ENST00000586196 166 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 ATP1B3P1-201ENST00000605365 821 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 OR6R2P-201ENST00000609216 300 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 Z82243.1-201ENST00000609432 473 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AC141273.2-201ENST00000618989 130 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 MTCO1P7-201ENST00000419523 1542 ntBASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHKBP1Q8TBC3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 HSPE1P11-201ENST00000339579 310 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 RNU6-874P-201ENST00000362390 105 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 RNU6-266P-201ENST00000364225 107 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 RNU1-74P-201ENST00000384108 171 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 MIR589-201ENST00000385238 99 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 RPL6P29-201ENST00000414863 865 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 DPPA2P2-201ENST00000418220 897 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 ATG3P1-201ENST00000419507 911 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 REREP1Y-201ENST00000422655 198 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 REREP2Y-201ENST00000439103 200 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AL118520.1-201ENST00000450770 291 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 RNU7-182P-201ENST00000459009 62 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 RN7SL860P-201ENST00000473738 223 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC012123.2-201ENST00000485809 248 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms