Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.3□□□□□ -1.56
PHC3Q8NDX5 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.3□□□□□ -1.56
PHC3Q8NDX5 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PHC3Q8NDX5 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PHC3Q8NDX5 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHC3Q8NDX5 MTND4P27-201ENST00000450813 1354 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 MIR133B-201ENST00000362210 119 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 RNU6-1284P-201ENST00000363701 100 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 Y_RNA.414-201ENST00000384011 101 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AL592114.1-201ENST00000403842 483 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 RPS4XP9-201ENST00000405151 780 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 RNA5SP56-201ENST00000410277 118 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 RNU6-387P-201ENST00000411331 105 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 RPS7P15-201ENST00000415804 584 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AL031584.1-201ENST00000447169 754 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 HMGB3P21-201ENST00000452483 547 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 SNORD19B-201ENST00000459623 84 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 RPL5P30-201ENST00000465511 891 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 HMGB1P25-201ENST00000468402 607 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 KLHL2P1-201ENST00000508691 521 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AC100870.1-201ENST00000522035 505 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AP005597.4-201ENST00000526762 229 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 MIR3176-201ENST00000582210 90 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AL669831.4-202ENST00000590817 238 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AC008638.3-201ENST00000603341 463 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AL390240.1-201ENST00000612950 384 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AL512624.1-201ENST00000613638 469 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AC073869.10-201ENST00000642016 354 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 AL133243.3-201ENST00000617415 3004 ntBASIC5.29□□□□□ -1.56
PHC3Q8NDX5 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHC3Q8NDX5 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 RNU6-1287P-201ENST00000362914 107 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 Y_RNA.138-201ENST00000363462 102 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 RNU6-1060P-201ENST00000384664 107 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 RPL21P24-201ENST00000413752 448 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 UBE2FP1-201ENST00000416536 447 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 RNA5SP103-201ENST00000459503 118 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 RNU6-1208P-201ENST00000459588 107 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 RN7SL189P-201ENST00000468631 289 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AC092754.1-201ENST00000472975 479 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AC004453.1-201ENST00000487895 408 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 RPL23AP55-201ENST00000498163 452 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AC098976.1-201ENST00000513014 541 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AL137161.1-201ENST00000532231 390 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AC067852.4-201ENST00000590314 478 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AL592436.1-201ENST00000605135 558 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 uc_338.15-201ENST00000615470 191 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 MIR6837-201ENST00000620884 64 ntBASIC5.28□□□□□ -1.56
PHC3Q8NDX5 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms