Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.32□□□□□ -1.72
USP38Q8NB14 AC022968.1-201ENST00000567372 442 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AC008088.1-201ENST00000580993 280 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.32□□□□□ -1.72
USP38Q8NB14 AC090616.2-202ENST00000584248 222 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.32□□□□□ -1.72
USP38Q8NB14 AC020914.4-201ENST00000597690 277 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.32□□□□□ -1.72
USP38Q8NB14 AL596327.1-201ENST00000603629 213 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AC025588.4-201ENST00000615802 908 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AL031667.3-201ENST00000620124 655 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AL356596.1-201ENST00000624230 379 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP38Q8NB14 FAM35DP-201ENST00000323387 2712 ntBASIC4.32□□□□□ -1.72
USP38Q8NB14 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.32□□□□□ -1.72
USP38Q8NB14 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
USP38Q8NB14 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP38Q8NB14 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
USP38Q8NB14 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.31□□□□□ -1.72
USP38Q8NB14 AL022578.1-201ENST00000439330 1433 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP38Q8NB14 RPL21P132-201ENST00000331267 462 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 RNU6-730P-201ENST00000383954 104 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 RNU6-878P-201ENST00000384578 110 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 Y_RNA.560-201ENST00000384689 102 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 AC007066.1-201ENST00000392902 381 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 RNU2-15P-201ENST00000410692 191 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 RPL7AP73-201ENST00000413490 353 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.31□□□□□ -1.72
USP38Q8NB14 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.31□□□□□ -1.72
USP38Q8NB14 MTCYBP24-201ENST00000420387 1106 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.31□□□□□ -1.72
USP38Q8NB14 PSMA6P3-201ENST00000428242 164 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.31□□□□□ -1.72
USP38Q8NB14 TXNL1P1-201ENST00000429528 554 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.31□□□□□ -1.72
USP38Q8NB14 AL117351.1-201ENST00000438864 766 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 HSPE1P28-201ENST00000443139 211 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.31□□□□□ -1.72
USP38Q8NB14 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.31□□□□□ -1.72
USP38Q8NB14 AC017015.1-201ENST00000477387 286 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.31□□□□□ -1.72
USP38Q8NB14 AC068305.1-201ENST00000497406 726 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.31□□□□□ -1.72
USP38Q8NB14 OR5H5P-201ENST00000503164 928 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.31□□□□□ -1.72
USP38Q8NB14 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
USP38Q8NB14 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.31□□□□□ -1.72
USP38Q8NB14 RNA5SP164-201ENST00000516533 110 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.31□□□□□ -1.72
USP38Q8NB14 MTCO1P47-201ENST00000523889 1271 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 GNRHR2P1-201ENST00000555315 631 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.31□□□□□ -1.72
USP38Q8NB14 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.31□□□□□ -1.72
USP38Q8NB14 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.31□□□□□ -1.72
USP38Q8NB14 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.31□□□□□ -1.72
USP38Q8NB14 BBIP1P1-201ENST00000602999 279 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 AC018714.1-201ENST00000605028 208 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 HMGN2P28-201ENST00000606102 262 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 AC080013.4-201ENST00000607624 649 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 MIR486-1-201ENST00000612171 68 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 AF246928.1-201ENST00000623768 87 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 AC079248.2-201ENST00000623779 326 ntBASIC4.31□□□□□ -1.72
USP38Q8NB14 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.31□□□□□ -1.72
USP38Q8NB14 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.31□□□□□ -1.72
USP38Q8NB14 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP38Q8NB14 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP38Q8NB14 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP38Q8NB14 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.31□□□□□ -1.72
USP38Q8NB14 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP38Q8NB14 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.3□□□□□ -1.72
USP38Q8NB14 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP38Q8NB14 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP38Q8NB14 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP38Q8NB14 RNU6-289P-201ENST00000364093 107 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP38Q8NB14 U1.1-201ENST00000384101 164 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 Y_RNA.510-201ENST00000384511 114 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 RN7SKP284-201ENST00000411002 343 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.3□□□□□ -1.72
USP38Q8NB14 AC083875.1-201ENST00000419509 405 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 AL365203.2-201ENST00000423444 196 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 AC019178.2-201ENST00000423595 505 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 MTCYBP39-201ENST00000437562 491 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 USP9YP10-201ENST00000454868 628 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 SNORD108-201ENST00000459332 71 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP38Q8NB14 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.3□□□□□ -1.72
USP38Q8NB14 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.3□□□□□ -1.72
USP38Q8NB14 USP9YP5-201ENST00000511770 630 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.3□□□□□ -1.72
USP38Q8NB14 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.3□□□□□ -1.72
USP38Q8NB14 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.3□□□□□ -1.72
USP38Q8NB14 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.3□□□□□ -1.72
USP38Q8NB14 AC090888.1-201ENST00000561335 1141 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.3□□□□□ -1.72
USP38Q8NB14 RPL23AP92-201ENST00000603609 255 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms