Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 AC034236.1-201ENST00000469891 373 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 RNF138P1-201ENST00000502765 546 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 AC009812.2-201ENST00000517657 457 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 AP002404.1-201ENST00000532005 451 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 AC092470.1-201ENST00000546187 132 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 ZNF971P-201ENST00000562068 1249 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 AC055876.1-202ENST00000567053 138 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 DUXAP4-201ENST00000603046 613 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 AC012468.1-201ENST00000604888 430 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 MIR3651-201ENST00000630427 90 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 MIR422A-201ENST00000362286 90 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 RNU6-629P-201ENST00000384061 103 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AC092638.1-201ENST00000411966 1275 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 Z99714.1-201ENST00000450463 807 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 snoU13.3-201ENST00000459441 104 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 CAB39P1-201ENST00000502277 460 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 MTCO3P44-201ENST00000510977 541 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 MTCO3P27-201ENST00000514397 196 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 OR8K4P-201ENST00000534608 872 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AC107016.2-201ENST00000547968 190 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AC093510.2-201ENST00000562820 896 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AC022069.1-201ENST00000582910 658 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AC084824.5-201ENST00000612009 413 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AC068831.7-201ENST00000616954 363 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 MIR8057-201ENST00000620957 69 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AP000676.4-201ENST00000624659 623 ntBASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CCDC65Q8IXS2 AC073346.2-201ENST00000624724 2058 ntBASIC3.28□□□□□ -1.89
CCDC65Q8IXS2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 SNORA40.4-201ENST00000390971 128 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 RPL21P75-201ENST00000396599 483 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 RPL21P28-201ENST00000401418 483 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AL592114.1-201ENST00000403842 483 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 U3.42-201ENST00000408746 214 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 RNA5SP492-201ENST00000411330 114 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 RPL7P8-201ENST00000411964 730 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 KRR1P1-201ENST00000419430 803 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 SEPT14P24-201ENST00000447236 180 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AL162389.1-201ENST00000449233 177 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 RPL21P39-201ENST00000463605 483 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AC011979.1-201ENST00000472300 483 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 RPL21P93-201ENST00000480465 489 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AC233702.1-201ENST00000482905 502 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AC087190.1-201ENST00000484462 480 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AC093591.1-201ENST00000491435 481 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AL024509.2-201ENST00000493462 493 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 RPL21P16-201ENST00000495531 483 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 MTCYBP37-201ENST00000510642 1133 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AC109471.1-201ENST00000511631 612 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 RNU5A-7P-201ENST00000515979 116 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AP003355.1-201ENST00000518956 587 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 OR5G4P-201ENST00000525251 760 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 H3F3AP1-201ENST00000559984 334 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 MIR5195-201ENST00000583555 115 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 BNIP3P33-201ENST00000598912 569 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms