Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 MIR16-2-201ENST00000362117 81 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 RNU6-374P-201ENST00000364146 108 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 RPL21P75-201ENST00000396599 483 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 RPL21P28-201ENST00000401418 483 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 ATP5F1P6-201ENST00000402768 767 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AL592114.1-201ENST00000403842 483 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 USP9YP19-201ENST00000412165 485 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AL445183.3-201ENST00000414168 502 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 DUTP6-201ENST00000425573 462 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 RPL17P35-201ENST00000432217 549 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 DNAJC19P8-201ENST00000452887 259 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 BX510359.1-201ENST00000456973 237 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 snoU13.4-201ENST00000458916 104 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 RPL21P39-201ENST00000463605 483 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AC011979.1-201ENST00000472300 483 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 RPL21P93-201ENST00000480465 489 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AC233702.1-201ENST00000482905 502 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AC087190.1-201ENST00000484462 480 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AC093591.1-201ENST00000491435 481 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 RPL21P16-201ENST00000495531 483 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AC004062.1-201ENST00000509926 645 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AC104108.1-201ENST00000509930 412 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 MTCYBP37-201ENST00000510642 1133 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 RNU6-202P-201ENST00000515998 96 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 SETP2-201ENST00000553886 926 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AC103881.1-201ENST00000603476 538 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AC096586.1-201ENST00000610267 561 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 AL356094.1-201ENST00000624663 1212 ntBASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
CDKL3Q8IVW4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 GABRG2-229ENST00000641017 3628 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 MIR422A-201ENST00000362286 90 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 RNU6-444P-201ENST00000383988 108 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 RNU6-1027P-201ENST00000383998 107 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 RNU6-851P-201ENST00000384565 107 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 MIR181A2-201ENST00000384863 110 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 PTGES3P2-201ENST00000407942 482 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 MIR1289-1-201ENST00000408836 144 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 OFD1P18Y-201ENST00000420889 959 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AL606495.1-201ENST00000422100 813 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AC093151.1-201ENST00000427711 313 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AC022018.1-201ENST00000430685 241 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 RPS29P6-201ENST00000438196 145 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 RPS26P30-201ENST00000443431 335 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 RPL37P4-201ENST00000448908 268 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AC112492.1-201ENST00000449607 712 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 RPL7P55-201ENST00000450522 746 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 BX248409.1-201ENST00000455497 255 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 RPL21P47-201ENST00000483696 477 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AC105914.1-201ENST00000511798 226 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 SCGB1D5P-201ENST00000515134 247 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AP000916.1-201ENST00000533869 835 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AC006504.3-201ENST00000586818 523 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AC012493.2-201ENST00000595083 291 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AC113368.1-201ENST00000603736 382 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 CYCSP41-201ENST00000616920 296 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AC006213.5-201ENST00000619673 288 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AC132825.7-201ENST00000638744 335 ntBASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDKL3Q8IVW4 AL645568.2-201ENST00000432815 1337 ntBASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AL138885.1-201ENST00000405921 675 ntBASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 SNORD88.1-201ENST00000408684 91 ntBASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AC008173.1-201ENST00000418901 264 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms