Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 USP9YP32-201ENST00000452432 430 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 RAD23BP3-201ENST00000454157 1152 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AL445669.2-201ENST00000454425 421 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 SNORA59A-201ENST00000459326 152 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 RPL5P23-201ENST00000496040 868 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AL358832.1-201ENST00000497800 389 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AC005178.1-201ENST00000508392 440 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 Y_RNA.688-201ENST00000516565 95 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AL353997.4-201ENST00000586196 166 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 HMGN2P28-201ENST00000606102 262 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AP005264.7-201ENST00000625003 745 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AC006927.3-201ENST00000638789 384 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AL031985.3-201ENST00000565390 2449 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 OR11H5P-202ENST00000641612 1325 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 RN7SKP44-201ENST00000363602 316 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 RNA5SP167-201ENST00000365461 116 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 RPL23AP48-201ENST00000406913 488 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 MIR1305-201ENST00000408300 86 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AC090960.1-201ENST00000421072 306 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AL139247.1-201ENST00000422768 325 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 MED14P1-201ENST00000430517 648 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 EZH2P1-201ENST00000431167 291 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AL159987.2-201ENST00000432754 307 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 MTCO1P27-201ENST00000448269 226 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AC092045.1-201ENST00000495716 1231 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 OR5AP1P-201ENST00000529730 940 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AC141257.3-201ENST00000572906 215 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AP001004.1-201ENST00000582468 324 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 MTCYBP22-201ENST00000603788 447 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AC112187.2-201ENST00000604345 283 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 AC018755.4-201ENST00000619715 454 ntBASIC4.25□□□□□ -1.73
HERC6Q8IVU3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
HERC6Q8IVU3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 Y_RNA.111-201ENST00000363248 100 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 RNU4-40P-201ENST00000364351 143 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AC245052.5-201ENST00000416320 649 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 Z99497.1-201ENST00000421282 135 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AL513174.1-201ENST00000423182 629 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 MTND4LP10-201ENST00000435146 291 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 UBE2D3P4-201ENST00000441973 436 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 OR6C5P-201ENST00000452388 923 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AC097262.1-201ENST00000452559 548 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 FABP3P2-201ENST00000453169 399 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.24□□□□□ -1.73
HERC6Q8IVU3 RPL21P11-201ENST00000461458 483 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AP001025.2-201ENST00000490908 477 ntBASIC4.24□□□□□ -1.73
HERC6Q8IVU3 AC139783.2-201ENST00000504847 1145 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms